RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 CNTLNQ9NXG0 1405 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 STAU1O95793 577 aaKnown RBP8.37□□□□□ -1.07
USP41-204ENST00000486536 HSPA2P54652 639 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 WNT7BP56706 349 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 SKOR1P84550 965 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 EAPPQ56P03 285 aaPredicted RBP8.37□□□□□ -1.07
USP41-204ENST00000486536 RGL4Q8IZJ4 473 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
USP41-204ENST00000486536 ZC3H13Q5T200 1668 aaKnown RBP8.37□□□□□ -1.07
USP41-204ENST00000486536 WASLO00401 505 aaPredicted RBP8.36□□□□□ -1.07
USP41-204ENST00000486536 INHAP05111 366 aa8.36□□□□□ -1.07
USP41-204ENST00000486536 CYLDQ9NQC7 956 aa8.36□□□□□ -1.07
USP41-204ENST00000486536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
USP41-204ENST00000486536 NOS1P29475 1434 aa8.36□□□□□ -1.07
USP41-204ENST00000486536 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 NEURL4Q96JN8 1562 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 E9PCH4 1651 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 CDK15Q96Q40 435 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 SLC4A9Q96Q91 983 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 TSPAN10Q9H1Z9 355 aaPredicted RBP8.35□□□□□ -1.07
USP41-204ENST00000486536 UHRF1BP1Q6BDS2 1440 aa8.35□□□□□ -1.07
USP41-204ENST00000486536 RNF223E7ERA6 249 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 GRM5P41594 1212 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 EPHA4P54764 986 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.07
USP41-204ENST00000486536 RBCK1Q9BYM8 510 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 SAP130Q9H0E3 1048 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 BCL11AQ9H165 835 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 ETNK1Q9HBU6 452 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 SLC52A1Q9NWF4 448 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 SPATA31E1Q6ZUB1 1445 aa8.34□□□□□ -1.07
USP41-204ENST00000486536 A0A1W2PRU2 124 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
USP41-204ENST00000486536 MPSTP25325 297 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 PLA2G2CQ5R387 149 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 C16orf46Q6P387 395 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 EHBP1Q8NDI1 1231 aa8.33□□□□□ -1.08
USP41-204ENST00000486536 CAMSAP1Q5T5Y3 1602 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 NDUFB5O43674 189 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 GNRH1P01148 92 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 MLECQ14165 292 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
USP41-204ENST00000486536 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
USP41-204ENST00000486536 DCAF11Q8TEB1 546 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
USP41-204ENST00000486536 RPGRIP1LQ68CZ1 1315 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 LILRA1O75019 489 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
USP41-204ENST00000486536 FSHRP23945 695 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 RPIAP49247 311 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 FOXK2Q01167 660 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 MYT1Q01538 1121 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 AAMPQ13685 434 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 NBPF8Q3BBV2 869 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 RGL3Q3MIN7 710 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 ESCO1Q5FWF5 840 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 TBCELQ5QJ74 424 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 TMC1Q8TDI8 760 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 ZMYM3Q14202 1370 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 ERVK-7P63135 1459 aa8.31□□□□□ -1.08
USP41-204ENST00000486536 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 CEP152O94986 1710 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 SPHKAPQ2M3C7 1700 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 A6NJY4 79 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 P4HBP07237 508 aaKnown RBP8.3□□□□□ -1.08
USP41-204ENST00000486536 GGCXP38435 758 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 SMTNP53814 917 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 KCNC4Q03721 635 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 COX20Q5RI15 118 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 CYP2U1Q7Z449 544 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 MPNDQ8N594 471 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 C2orf49Q9BVC5 232 aaPredicted RBP8.3□□□□□ -1.08
USP41-204ENST00000486536 SCHIP1Q9P0W5 487 aaPredicted RBP8.3□□□□□ -1.08
USP41-204ENST00000486536 STIM2Q9P246 746 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 SPATA31D1Q6ZQQ2 1576 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 FER1L4A9Z1Z3 1794 aa8.3□□□□□ -1.08
USP41-204ENST00000486536 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 RECKO95980 971 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
USP41-204ENST00000486536 EIF1AXP47813 144 aaKnown RBP8.29□□□□□ -1.08
USP41-204ENST00000486536 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 IDI1Q13907 227 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 TSNAXIP1Q2TAA8 658 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 PPP1R26Q5T8A7 1209 aaPredicted RBP8.29□□□□□ -1.08
USP41-204ENST00000486536 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 SIGLEC1Q9BZZ2 1709 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 ADGRB3O60242 1522 aa8.29□□□□□ -1.08
USP41-204ENST00000486536 MYOM2P54296 1465 aa8.28□□□□□ -1.08
USP41-204ENST00000486536 RALGAPBQ86X10 1494 aa8.28□□□□□ -1.08
USP41-204ENST00000486536 TREHO43280 583 aa8.28□□□□□ -1.08
USP41-204ENST00000486536 MTFR1Q15390 333 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms