RNA–Protein interactions for RNA: ENST00000485963.5

PI4KA-215, Transcript of phosphatidylinositol 4-kinase alpha, human

TSL 2

Gene PI4KA, Length 2,301 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PI4KA-215	ENST00000485963	SHANK3	Q9BYB0	1731 aa		28.47	■■■□□ 2.15
PI4KA-215	ENST00000485963	TTC41P	Q6P2S7	1318 aa		28.46	■■■□□ 2.15
PI4KA-215	ENST00000485963	PLEKHG2	Q9H7P9	1386 aa		28.46	■■■□□ 2.15
PI4KA-215	ENST00000485963	HEG1	Q9ULI3	1381 aa		28.46	■■■□□ 2.15
PI4KA-215	ENST00000485963	CPA1	P15085	419 aa		28.46	■■■□□ 2.15
PI4KA-215	ENST00000485963	KIAA1211	Q6ZU35	1233 aa		28.46	■■■□□ 2.15
PI4KA-215	ENST00000485963	ALDH1L1	O75891	902 aa		28.45	■■■□□ 2.14
PI4KA-215	ENST00000485963	AK2	P54819	239 aa		28.45	■■■□□ 2.14
PI4KA-215	ENST00000485963	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	28.45	■■■□□ 2.14
PI4KA-215	ENST00000485963	GLI3	P10071	1580 aa		28.45	■■■□□ 2.14
PI4KA-215	ENST00000485963	MBD3	O95983	291 aa		28.44	■■■□□ 2.14
PI4KA-215	ENST00000485963	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.44	■■■□□ 2.14	2e-7	■□□□□ 10.3
PI4KA-215	ENST00000485963	ZCRB1	Q8TBF4	217 aa	Known RBP	28.44	■■■□□ 2.14
PI4KA-215	ENST00000485963	QTRT2	Q9H974	415 aa	Known RBP	28.44	■■■□□ 2.14
PI4KA-215	ENST00000485963	AIMP1	Q12904	312 aa	Known RBP	28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	FAM98C	Q17RN3	349 aa	Known RBP	28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	BARGIN	Q6ZT62	677 aa		28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	RUFY3	Q7L099	469 aa		28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	GADD45B	O75293	160 aa	Predicted RBP	28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	PTH1R	Q03431	593 aa		28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	KAZALD1	Q96I82	304 aa		28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	GJD4	Q96KN9	370 aa	Predicted RBP	28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	ECHDC1	Q9NTX5	307 aa		28.43	■■■□□ 2.14
PI4KA-215	ENST00000485963	DIAPH3	Q9NSV4	1193 aa		28.42	■■■□□ 2.14
PI4KA-215	ENST00000485963	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.42	■■■□□ 2.14
PI4KA-215	ENST00000485963	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.42	■■■□□ 2.14
PI4KA-215	ENST00000485963	ZNF772	Q68DY9	489 aa	Predicted RBP	28.41	■■■□□ 2.14
PI4KA-215	ENST00000485963	ZSCAN30	Q86W11	494 aa		28.41	■■■□□ 2.14
PI4KA-215	ENST00000485963	SUCLG2	Q96I99	432 aa		28.41	■■■□□ 2.14
PI4KA-215	ENST00000485963	WDR33	Q9C0J8	1336 aa	Known RBP	28.41	■■■□□ 2.14
PI4KA-215	ENST00000485963	IFIT2	P09913	472 aa	Known RBP	28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	USP48	Q86UV5	1035 aa		28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	DTNB	O60941	627 aa		28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	CAST	P20810	708 aa	Known RBP	28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	AACS	Q86V21	672 aa		28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	PDLIM2	Q96JY6	352 aa		28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	HYPK	Q9NX55	129 aa		28.4	■■■□□ 2.14
PI4KA-215	ENST00000485963	GRM8	O00222	908 aa		28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	BICC1	Q9H694	974 aa	Known RBP	28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	LIMCH1	Q9UPQ0	1083 aa		28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	PCDH11X	Q9BZA7	1347 aa		28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	PCDH11Y	Q9BZA8	1340 aa		28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	TCHH	Q07283	1943 aa		28.39	■■■□□ 2.14
PI4KA-215	ENST00000485963	SLC39A6	Q13433	755 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	PDIA6	Q15084	440 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	ADCK5	Q3MIX3	580 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	LINS1	Q8NG48	757 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	SASH1	O94885	1247 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	RNF214	Q8ND24	703 aa		28.38	■■■□□ 2.13
PI4KA-215	ENST00000485963	EXOC5	O00471	708 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	LARGE1	O95461	756 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	PHKG2	P15735	406 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	IFNL2	Q8IZJ0	200 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	DDX54	Q8TDD1	881 aa	Known RBP	28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963		A0A0G2JS52	829 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	CYP27B1	O15528	508 aa		28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	PRPF40B	Q6NWY9	871 aa	Known RBP	28.37	■■■□□ 2.13
PI4KA-215	ENST00000485963	ERC1	Q8IUD2	1116 aa		28.36	■■■□□ 2.13
PI4KA-215	ENST00000485963	EAF2	Q96CJ1	260 aa	Predicted RBP	28.36	■■■□□ 2.13
PI4KA-215	ENST00000485963	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.36	■■■□□ 2.13
PI4KA-215	ENST00000485963	TNS2	Q63HR2	1409 aa		28.36	■■■□□ 2.13
PI4KA-215	ENST00000485963	THSD7A	Q9UPZ6	1657 aa		28.36	■■■□□ 2.13
PI4KA-215	ENST00000485963	SCN11A	Q9UI33	1791 aa		28.35	■■■□□ 2.13
PI4KA-215	ENST00000485963	DDB1	Q16531	1140 aa		28.35	■■■□□ 2.13
PI4KA-215	ENST00000485963	RUFY2	Q8WXA3	655 aa		28.35	■■■□□ 2.13
PI4KA-215	ENST00000485963	CCDC8	Q9H0W5	538 aa	Predicted RBP	28.35	■■■□□ 2.13
PI4KA-215	ENST00000485963	IGKV5-2	P06315	115 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	SYT1	P21579	422 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	GLIPR1L2	Q4G1C9	344 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	GPATCH3	Q96I76	525 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	JAKMIP1	Q96N16	626 aa	Known RBP	28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	EVI5L	Q96CN4	794 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	SIL1	Q9H173	461 aa		28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	TLR7	Q9NYK1	1049 aa	Known RBP	28.34	■■■□□ 2.13
PI4KA-215	ENST00000485963	UTY	O14607	1347 aa		28.33	■■■□□ 2.13
PI4KA-215	ENST00000485963	KLHDC4	Q8TBB5	520 aa		28.33	■■■□□ 2.13
PI4KA-215	ENST00000485963	FAM227B	Q96M60	508 aa		28.33	■■■□□ 2.13
PI4KA-215	ENST00000485963	CNPY2	Q9Y2B0	182 aa		28.33	■■■□□ 2.13
PI4KA-215	ENST00000485963	ZSCAN22	P10073	491 aa	Predicted RBP	28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	STX6	O43752	255 aa		28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	DDX58	O95786	925 aa	Known RBP	28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	MYL6B	P14649	208 aa		28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	G3BP1	Q13283	466 aa	Known RBP eCLIP	28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	TPRN	Q4KMQ1	711 aa		28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	ZNF790	Q6PG37	636 aa		28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	HDAC5	Q9UQL6	1122 aa		28.32	■■■□□ 2.12
PI4KA-215	ENST00000485963	MSN	P26038	577 aa	Known RBP	28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	RIC3	Q7Z5B4	369 aa		28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	NECTIN1	Q15223	517 aa		28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	PDRG1	Q9NUG6	133 aa		28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	SMC3	Q9UQE7	1217 aa		28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	ADAMTS7	Q9UKP4	1686 aa		28.31	■■■□□ 2.12
PI4KA-215	ENST00000485963	CCDC83	Q8IWF9	413 aa		28.3	■■■□□ 2.12
PI4KA-215	ENST00000485963	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	28.3	■■■□□ 2.12
PI4KA-215	ENST00000485963	SIPA1L3	O60292	1781 aa	Predicted RBP	28.3	■■■□□ 2.12
PI4KA-215	ENST00000485963	COL9A3	Q14050	684 aa	Predicted RBP	28.3	■■■□□ 2.12
PI4KA-215	ENST00000485963	ZSWIM6	Q9HCJ5	1215 aa		28.3	■■■□□ 2.12
PI4KA-215	ENST00000485963	KAT6B	Q8WYB5	2073 aa		28.29	■■■□□ 2.12
PI4KA-215	ENST00000485963	HS1BP3	Q53T59	392 aa		28.29	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms