RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CWF19L2Q2TBE0 894 aaKnown RBP26.84■■□□□ 1.89
CLN5-202ENST00000485938 PHF8Q9UPP1 1060 aa26.84■■□□□ 1.89
CLN5-202ENST00000485938 NMIQ13287 307 aaPredicted RBP26.83■■□□□ 1.89
CLN5-202ENST00000485938 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
CLN5-202ENST00000485938 HIP1O00291 1037 aa26.83■■□□□ 1.89
CLN5-202ENST00000485938 HMGN5P82970 282 aaKnown RBP26.83■■□□□ 1.89
CLN5-202ENST00000485938 GIGYF1O75420 1035 aaPredicted RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 PLEKHO1Q53GL0 409 aaPredicted RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 LARP1BQ659C4 914 aaKnown RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 TTC6Q86TZ1 520 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 HEG1Q9ULI3 1381 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 SLC27A2O14975 620 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 SASH1O94885 1247 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 CCDC192P0DO97 292 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 PDIA4P13667 645 aaKnown RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 KCNJ4P48050 445 aa26.82■■□□□ 1.88
CLN5-202ENST00000485938 COL9A3Q14050 684 aaPredicted RBP26.82■■□□□ 1.88
CLN5-202ENST00000485938 RNMTO43148 476 aaKnown RBP26.81■■□□□ 1.88
CLN5-202ENST00000485938 GTF2F1P35269 517 aaKnown RBP eCLIP26.81■■□□□ 1.88
CLN5-202ENST00000485938 PLCB2Q00722 1185 aa26.81■■□□□ 1.88
CLN5-202ENST00000485938 EAF2Q96CJ1 260 aaPredicted RBP26.81■■□□□ 1.88
CLN5-202ENST00000485938 KAZALD1Q96I82 304 aa26.81■■□□□ 1.88
CLN5-202ENST00000485938 PSMA5P28066 241 aa26.81■■□□□ 1.88
CLN5-202ENST00000485938 KRT85P78386 507 aa26.81■■□□□ 1.88
CLN5-202ENST00000485938 LRRC59Q96AG4 307 aaKnown RBP26.81■■□□□ 1.88
CLN5-202ENST00000485938 ELP1O95163 1332 aa26.8■■□□□ 1.88
CLN5-202ENST00000485938 CDC37L1Q7L3B6 337 aa26.8■■□□□ 1.88
CLN5-202ENST00000485938 SUCLG2Q96I99 432 aa26.8■■□□□ 1.88
CLN5-202ENST00000485938 NCAPD2Q15021 1401 aa26.8■■□□□ 1.88
CLN5-202ENST00000485938 PXDNQ92626 1479 aa26.79■■□□□ 1.88
CLN5-202ENST00000485938 UTYO14607 1347 aa26.79■■□□□ 1.88
CLN5-202ENST00000485938 LINS1Q8NG48 757 aa26.79■■□□□ 1.88
CLN5-202ENST00000485938 KCNF1Q9H3M0 494 aa26.79■■□□□ 1.88
CLN5-202ENST00000485938 NPHP4O75161 1426 aaPredicted RBP26.79■■□□□ 1.88
CLN5-202ENST00000485938 GRM8O00222 908 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 KIAA1524Q8TCG1 905 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 OVOS2A0A0G2JMS6 1433 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 PHRF1Q9P1Y6 1649 aaKnown RBP26.78■■□□□ 1.88
CLN5-202ENST00000485938 A0A0D9SFI3 127 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 TPM3P06753 285 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 PDCP20941 246 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 AMOTQ4VCS5 1084 aa26.78■■□□□ 1.88
CLN5-202ENST00000485938 BICC1Q9H694 974 aaKnown RBP26.78■■□□□ 1.88
CLN5-202ENST00000485938 G3BP1Q13283 466 aaKnown RBP eCLIP26.77■■□□□ 1.88
CLN5-202ENST00000485938 FERMT3Q86UX7 667 aa26.77■■□□□ 1.88
CLN5-202ENST00000485938 JARID2Q92833 1246 aaPredicted RBP26.77■■□□□ 1.88
CLN5-202ENST00000485938 CCDC8Q9H0W5 538 aaPredicted RBP26.77■■□□□ 1.88
CLN5-202ENST00000485938 PRAMEF22A3QJZ6 481 aa26.77■■□□□ 1.88
CLN5-202ENST00000485938 ALDH8A1Q9H2A2 487 aaPredicted RBP26.77■■□□□ 1.88
CLN5-202ENST00000485938 TLR7Q9NYK1 1049 aaKnown RBP26.77■■□□□ 1.88
CLN5-202ENST00000485938 MED23Q9ULK4 1368 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 LIG1P18858 919 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 ANKRD1Q15327 319 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 MAP3K11Q16584 847 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 BLOC1S2Q6QNY1 142 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 FAM173BQ6P4H8 233 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 KCNH5Q8NCM2 988 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 FAM200AQ8TCP9 573 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 NUP62CLQ9H1M0 184 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 PYCARDQ9ULZ3 195 aa26.76■■□□□ 1.87
CLN5-202ENST00000485938 RPS6KB1P23443 525 aa26.75■■□□□ 1.87
CLN5-202ENST00000485938 RNF20Q5VTR2 975 aa26.75■■□□□ 1.87
CLN5-202ENST00000485938 TSC1Q92574 1164 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 MRVI1Q9Y6F6 885 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 TAF6LQ9Y6J9 622 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 TOB2Q14106 344 aaPredicted RBP26.74■■□□□ 1.87
CLN5-202ENST00000485938 ZNF710Q8N1W2 664 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 TCEANC2Q96MN5 208 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 FSD1Q9BTV5 496 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 BOLA2Q9H3K6 86 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 JCADQ9P266 1359 aa26.74■■□□□ 1.87
CLN5-202ENST00000485938 TYRO3Q06418 890 aa26.73■■□□□ 1.87
CLN5-202ENST00000485938 SPC24Q8NBT2 197 aa26.73■■□□□ 1.87
CLN5-202ENST00000485938 CHMP3Q9Y3E7 222 aa26.73■■□□□ 1.87
CLN5-202ENST00000485938 GOLGA6L6A8MZA4 724 aa26.72■■□□□ 1.87
CLN5-202ENST00000485938 CAMK4Q16566 473 aa26.72■■□□□ 1.87
CLN5-202ENST00000485938 SCAND2PQ9GZW5 306 aaPredicted RBP26.72■■□□□ 1.87
CLN5-202ENST00000485938 TSGA10IPQ3SY00 556 aa26.71■■□□□ 1.87
CLN5-202ENST00000485938 ARID3AQ99856 593 aa26.71■■□□□ 1.87
CLN5-202ENST00000485938 DDX58O95786 925 aaKnown RBP26.71■■□□□ 1.87
CLN5-202ENST00000485938 LARP1Q6PKG0 1096 aaKnown RBP26.71■■□□□ 1.87
CLN5-202ENST00000485938 CCDC94Q9BW85 323 aaPredicted RBP26.71■■□□□ 1.87
CLN5-202ENST00000485938 DDX21Q9NR30 783 aaKnown RBP eCLIP26.71■■□□□ 1.87
CLN5-202ENST00000485938 ZNF589Q86UQ0 364 aaPredicted RBP26.7■■□□□ 1.86
CLN5-202ENST00000485938 RBM33Q96EV2 1170 aaKnown RBP26.7■■□□□ 1.86
CLN5-202ENST00000485938 SIL1Q9H173 461 aa26.7■■□□□ 1.86
CLN5-202ENST00000485938 DACT1Q9NYF0 836 aa26.7■■□□□ 1.86
CLN5-202ENST00000485938 HMG20BQ9P0W2 317 aa26.7■■□□□ 1.86
CLN5-202ENST00000485938 KIF3AQ9Y496 699 aa26.7■■□□□ 1.86
CLN5-202ENST00000485938 SIPA1L3O60292 1781 aaPredicted RBP26.7■■□□□ 1.86
CLN5-202ENST00000485938 MRC1P22897 1456 aa26.7■■□□□ 1.86
CLN5-202ENST00000485938 NPHP3Q7Z494 1330 aa26.69■■□□□ 1.86
CLN5-202ENST00000485938 PSME1Q06323 249 aa26.69■■□□□ 1.86
CLN5-202ENST00000485938 SPATA32Q96LK8 384 aa26.69■■□□□ 1.86
CLN5-202ENST00000485938 TNMDQ9H2S6 317 aa26.69■■□□□ 1.86
CLN5-202ENST00000485938 IGKV5-2P06315 115 aa26.68■■□□□ 1.86
CLN5-202ENST00000485938 PDIA6Q15084 440 aa26.68■■□□□ 1.86
CLN5-202ENST00000485938 LUZP1Q86V48 1076 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms