RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GNAI3P08754 354 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 HMGB2P26583 209 aaKnown RBP14.23□□□□□ -0.13
SND1-212ENST00000485871 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 AK7Q96M32 723 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 C1orf115Q9H7X2 142 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 TSHZ2Q9NRE2 1034 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 NARFQ9UHQ1 456 aa14.23□□□□□ -0.13
SND1-212ENST00000485871 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
SND1-212ENST00000485871 H7C1W4 665 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 IGHDP01880 384 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 ADRA2BP18089 450 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 SSFA2P28290 1259 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 GPR162Q16538 588 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 HSP90AB3PQ58FF7 597 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 ARHGEF1Q92888 912 aaKnown RBP14.22□□□□□ -0.13
SND1-212ENST00000485871 KAZALD1Q96I82 304 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 MTFR1LQ9H019 292 aa14.22□□□□□ -0.13
SND1-212ENST00000485871 UTRNP46939 3433 aa14.21□□□□□ -0.13
SND1-212ENST00000485871 SLC15A2Q16348 729 aa14.21□□□□□ -0.13
SND1-212ENST00000485871 CEP85Q6P2H3 762 aa14.21□□□□□ -0.13
SND1-212ENST00000485871 CLEC4GQ6UXB4 293 aa14.21□□□□□ -0.13
SND1-212ENST00000485871 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
SND1-212ENST00000485871 CWC25Q9NXE8 425 aaPredicted RBP14.21□□□□□ -0.13
SND1-212ENST00000485871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 GNAI2P04899 355 aa14.2□□□□□ -0.14
SND1-212ENST00000485871 UBTFL1P0CB47 393 aaPredicted RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 HDAC1Q13547 482 aaPredicted RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 ANKRD44Q8N8A2 993 aa14.2□□□□□ -0.14
SND1-212ENST00000485871 ARXQ96QS3 562 aa14.2□□□□□ -0.14
SND1-212ENST00000485871 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
SND1-212ENST00000485871 TRAPPC3LQ5T215 181 aa14.19□□□□□ -0.14
SND1-212ENST00000485871 USPL1Q5W0Q7 1092 aa14.19□□□□□ -0.14
SND1-212ENST00000485871 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
SND1-212ENST00000485871 SUCLG2Q96I99 432 aa14.19□□□□□ -0.14
SND1-212ENST00000485871 C9orf78Q9NZ63 289 aaPredicted RBP14.19□□□□□ -0.14
SND1-212ENST00000485871 NRXN2Q9P2S2 1712 aa14.18□□□□□ -0.14
SND1-212ENST00000485871 CHD4Q14839 1912 aa14.18□□□□□ -0.14
SND1-212ENST00000485871 PHF14O94880 888 aa14.18□□□□□ -0.14
SND1-212ENST00000485871 GPTP24298 496 aa14.18□□□□□ -0.14
SND1-212ENST00000485871 MTX1Q13505 466 aa14.18□□□□□ -0.14
SND1-212ENST00000485871 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 PCCAP05165 728 aaPredicted RBP14.17□□□□□ -0.14
SND1-212ENST00000485871 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 RABL6Q3YEC7 729 aaPredicted RBP14.17□□□□□ -0.14
SND1-212ENST00000485871 EPHA10Q5JZY3 1008 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 TBC1D9BQ66K14 1250 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 UBE3BQ7Z3V4 1068 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 ZNF652Q9Y2D9 606 aa14.17□□□□□ -0.14
SND1-212ENST00000485871 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 PNMA6EA0A0J9YXQ4 647 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 GYS1P13807 737 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 RFC4P35249 363 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 PARP10Q53GL7 1025 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 CENPQQ7L2Z9 268 aaPredicted RBP14.16□□□□□ -0.14
SND1-212ENST00000485871 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
SND1-212ENST00000485871 SMC5Q8IY18 1101 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 ZBTB38Q8NAP3 1195 aaPredicted RBP14.16□□□□□ -0.14
SND1-212ENST00000485871 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
SND1-212ENST00000485871 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 PLA2G12BQ9BX93 195 aa14.16□□□□□ -0.14
SND1-212ENST00000485871 ZPR1O75312 459 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 NTSR2O95665 410 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 FOXO4P98177 505 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 POLA2Q14181 598 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 RWDD1Q9H446 243 aaPredicted RBP14.15□□□□□ -0.14
SND1-212ENST00000485871 BICC1Q9H694 974 aaKnown RBP14.15□□□□□ -0.14
SND1-212ENST00000485871 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
SND1-212ENST00000485871 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
SND1-212ENST00000485871 TNRC6CQ9HCJ0 1690 aaKnown RBP14.14□□□□□ -0.15
SND1-212ENST00000485871 SYNE4Q8N205 404 aa14.14□□□□□ -0.15
SND1-212ENST00000485871 FLAD1Q8NFF5 587 aa14.14□□□□□ -0.15
SND1-212ENST00000485871 FAM89AQ96GI7 184 aa14.14□□□□□ -0.15
SND1-212ENST00000485871 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
SND1-212ENST00000485871 NFIXQ14938 502 aa14.13□□□□□ -0.15
SND1-212ENST00000485871 RTL5Q5HYW3 569 aaPredicted RBP14.13□□□□□ -0.15
SND1-212ENST00000485871 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
SND1-212ENST00000485871 DCTPP1Q9H773 170 aa14.13□□□□□ -0.15
SND1-212ENST00000485871 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
SND1-212ENST00000485871 TM4SF1P30408 202 aa14.12□□□□□ -0.15
SND1-212ENST00000485871 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
SND1-212ENST00000485871 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
SND1-212ENST00000485871 SH3TC1Q8TE82 1336 aa14.12□□□□□ -0.15
SND1-212ENST00000485871 ABCC12Q96J65 1359 aa14.11□□□□□ -0.15
SND1-212ENST00000485871 CSF1RP07333 972 aa14.11□□□□□ -0.15
SND1-212ENST00000485871 RFX5P48382 616 aaPredicted RBP14.11□□□□□ -0.15
SND1-212ENST00000485871 RIC1Q4ADV7 1423 aa14.11□□□□□ -0.15
SND1-212ENST00000485871 COL4A1P02462 1669 aa14.1□□□□□ -0.15
SND1-212ENST00000485871 CARMIL3Q8ND23 1372 aa14.1□□□□□ -0.15
SND1-212ENST00000485871 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
SND1-212ENST00000485871 SRGAP3O43295 1099 aa14.1□□□□□ -0.15
SND1-212ENST00000485871 HMMRO75330 724 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 294.6 ms