RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 ZNF827Q17R98 1081 aa20.18■□□□□ 0.82
ZNF248-206ENST00000485560 USPL1Q5W0Q7 1092 aa20.18■□□□□ 0.82
ZNF248-206ENST00000485560 KAZALD1Q96I82 304 aa20.18■□□□□ 0.82
ZNF248-206ENST00000485560 UBN2Q6ZU65 1347 aa20.18■□□□□ 0.82
ZNF248-206ENST00000485560 ADRA2BP18089 450 aa20.17■□□□□ 0.82
ZNF248-206ENST00000485560 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
ZNF248-206ENST00000485560 UPF1Q92900 1129 aaKnown RBP eCLIP20.17■□□□□ 0.82
ZNF248-206ENST00000485560 AKT1S1Q96B36 256 aa20.17■□□□□ 0.82
ZNF248-206ENST00000485560 BCL2L12Q9HB09 334 aa20.17■□□□□ 0.82
ZNF248-206ENST00000485560 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
ZNF248-206ENST00000485560 ZPR1O75312 459 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 RFC4P35249 363 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 BAG6P46379 1132 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 ATP8B2P98198 1209 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
ZNF248-206ENST00000485560 HDAC5Q9UQL6 1122 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 SSFA2P28290 1259 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
ZNF248-206ENST00000485560 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
ZNF248-206ENST00000485560 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
ZNF248-206ENST00000485560 RGL2O15211 777 aa20.15■□□□□ 0.82
ZNF248-206ENST00000485560 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
ZNF248-206ENST00000485560 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
ZNF248-206ENST00000485560 BICC1Q9H694 974 aaKnown RBP20.14■□□□□ 0.81
ZNF248-206ENST00000485560 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
ZNF248-206ENST00000485560 PCCAP05165 728 aaPredicted RBP20.13■□□□□ 0.81
ZNF248-206ENST00000485560 PPP1R42Q7Z4L9 355 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 CCDC125Q86Z20 511 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 ZBTB38Q8NAP3 1195 aaPredicted RBP20.13■□□□□ 0.81
ZNF248-206ENST00000485560 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 SUSD4Q5VX71 490 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 MYH3P11055 1940 aa20.13■□□□□ 0.81
ZNF248-206ENST00000485560 HMMRO75330 724 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 MTX1Q13505 466 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 SMC5Q8IY18 1101 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 TRMT112Q9UI30 125 aaKnown RBP20.12■□□□□ 0.81
ZNF248-206ENST00000485560 COL24A1Q17RW2 1714 aa20.12■□□□□ 0.81
ZNF248-206ENST00000485560 BICDL1Q6ZP65 573 aa20.11■□□□□ 0.81
ZNF248-206ENST00000485560 FAM177BA6PVY3 158 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 SSH3Q8TE77 659 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 ANO8Q9HCE9 1232 aaPredicted RBP20.1■□□□□ 0.81
ZNF248-206ENST00000485560 FOXO4P98177 505 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 POLA2Q14181 598 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 DCTPP1Q9H773 170 aa20.1■□□□□ 0.81
ZNF248-206ENST00000485560 CDHR2Q9BYE9 1310 aa20.09■□□□□ 0.81
ZNF248-206ENST00000485560 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
ZNF248-206ENST00000485560 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
ZNF248-206ENST00000485560 GCC1Q96CN9 775 aa20.09■□□□□ 0.81
ZNF248-206ENST00000485560 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
ZNF248-206ENST00000485560 DDX60Q8IY21 1712 aaKnown RBP20.09■□□□□ 0.81
ZNF248-206ENST00000485560 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
ZNF248-206ENST00000485560 SOCS7O14512 581 aa20.08■□□□□ 0.81
ZNF248-206ENST00000485560 NTSR2O95665 410 aa20.08■□□□□ 0.81
ZNF248-206ENST00000485560 GYS1P13807 737 aa20.08■□□□□ 0.81
ZNF248-206ENST00000485560 SKAP1Q86WV1 359 aa20.08■□□□□ 0.81
ZNF248-206ENST00000485560 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 SETDB2Q96T68 719 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 LAMB2P55268 1798 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 PNPLA7Q6ZV29 1317 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 CASZ1Q86V15 1759 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
ZNF248-206ENST00000485560 LMBR1LQ6UX01 489 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 FLAD1Q8NFF5 587 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 PLA2G12BQ9BX93 195 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 PDZRN3Q9UPQ7 1066 aa20.07■□□□□ 0.8
ZNF248-206ENST00000485560 STK32BQ9NY57 414 aa20.06■□□□□ 0.8
ZNF248-206ENST00000485560 MSH5O43196 834 aa20.05■□□□□ 0.8
ZNF248-206ENST00000485560 NFIXQ14938 502 aa20.05■□□□□ 0.8
ZNF248-206ENST00000485560 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
ZNF248-206ENST00000485560 EXOC6BQ9Y2D4 811 aa20.05■□□□□ 0.8
ZNF248-206ENST00000485560 CHMP3Q9Y3E7 222 aa20.04■□□□□ 0.8
ZNF248-206ENST00000485560 PDE8AO60658 829 aa20.03■□□□□ 0.8
ZNF248-206ENST00000485560 HCLS1P14317 486 aaPredicted RBP20.03■□□□□ 0.8
ZNF248-206ENST00000485560 NUCB1Q02818 461 aa20.03■□□□□ 0.8
ZNF248-206ENST00000485560 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
ZNF248-206ENST00000485560 PA2G4Q9UQ80 394 aaKnown RBP20.03■□□□□ 0.8
ZNF248-206ENST00000485560 APBB1O00213 710 aa20.02■□□□□ 0.8
ZNF248-206ENST00000485560 SURF6O75683 361 aaKnown RBP20.02■□□□□ 0.8
ZNF248-206ENST00000485560 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.8
ZNF248-206ENST00000485560 ERFEQ4G0M1 354 aa20.02■□□□□ 0.8
ZNF248-206ENST00000485560 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
ZNF248-206ENST00000485560 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
ZNF248-206ENST00000485560 CSF1RP07333 972 aa20.02■□□□□ 0.79
ZNF248-206ENST00000485560 TM4SF1P30408 202 aa20.02■□□□□ 0.79
ZNF248-206ENST00000485560 CTSWP56202 376 aa20.02■□□□□ 0.79
ZNF248-206ENST00000485560 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.79
ZNF248-206ENST00000485560 NYXQ9GZU5 481 aa20.02■□□□□ 0.79
ZNF248-206ENST00000485560 CHD1LQ86WJ1 897 aa20.01■□□□□ 0.79
ZNF248-206ENST00000485560 TTLL11Q8NHH1 800 aa20.01■□□□□ 0.79
ZNF248-206ENST00000485560 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
ZNF248-206ENST00000485560 NOP58Q9Y2X3 529 aaKnown RBP20.01■□□□□ 0.79
ZNF248-206ENST00000485560 GTF2E1P29083 439 aaPredicted RBP20■□□□□ 0.79
ZNF248-206ENST00000485560 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
ZNF248-206ENST00000485560 LNPKQ9C0E8 428 aa20■□□□□ 0.79
ZNF248-206ENST00000485560 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms