RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 FSTL1Q12841 308 aa20.67■□□□□ 0.9
SIK3-211ENST00000485363 HDGFL1Q5TGJ6 251 aa20.67■□□□□ 0.9
SIK3-211ENST00000485363 RTKN2Q8IZC4 609 aa20.67■□□□□ 0.9
SIK3-211ENST00000485363 RPGRQ92834 1020 aaKnown RBP20.67■□□□□ 0.9
SIK3-211ENST00000485363 FKBP4Q02790 459 aaKnown RBP eCLIP20.66■□□□□ 0.9
SIK3-211ENST00000485363 UTP14AQ9BVJ6 771 aaKnown RBP20.66■□□□□ 0.9
SIK3-211ENST00000485363 MBIPQ9NS73 344 aa20.66■□□□□ 0.9
SIK3-211ENST00000485363 CHPF2Q9P2E5 772 aa20.66■□□□□ 0.9
SIK3-211ENST00000485363 HOXA10P31260 410 aaPredicted RBP20.65■□□□□ 0.9
SIK3-211ENST00000485363 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
SIK3-211ENST00000485363 DBF4Q9UBU7 674 aaPredicted RBP20.65■□□□□ 0.9
SIK3-211ENST00000485363 WDR90Q96KV7 1748 aa20.64■□□□□ 0.9
SIK3-211ENST00000485363 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
SIK3-211ENST00000485363 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
SIK3-211ENST00000485363 GNAI1P63096 354 aa20.64■□□□□ 0.89
SIK3-211ENST00000485363 OLFM4Q6UX06 510 aa20.64■□□□□ 0.89
SIK3-211ENST00000485363 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
SIK3-211ENST00000485363 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
SIK3-211ENST00000485363 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
SIK3-211ENST00000485363 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
SIK3-211ENST00000485363 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
SIK3-211ENST00000485363 SMC1BQ8NDV3 1235 aa20.63■□□□□ 0.89
SIK3-211ENST00000485363 SLC10A5Q5PT55 438 aa20.62■□□□□ 0.89
SIK3-211ENST00000485363 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
SIK3-211ENST00000485363 CRAMP1Q96RY5 1269 aa20.62■□□□□ 0.89
SIK3-211ENST00000485363 ZNF277Q9NRM2 450 aaPredicted RBP20.62■□□□□ 0.89
SIK3-211ENST00000485363 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
SIK3-211ENST00000485363 NLRP10Q86W26 655 aa20.61■□□□□ 0.89
SIK3-211ENST00000485363 PLBD2Q8NHP8 589 aa20.61■□□□□ 0.89
SIK3-211ENST00000485363 HYPKQ9NX55 129 aa20.61■□□□□ 0.89
SIK3-211ENST00000485363 POTECB2RU33 542 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 DDNO94850 711 aaPredicted RBP20.6■□□□□ 0.89
SIK3-211ENST00000485363 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 ANKRD13DQ6ZTN6 518 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 SYNE4Q8N205 404 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 PSMD1Q99460 953 aa20.6■□□□□ 0.89
SIK3-211ENST00000485363 PPEF1O14829 653 aaPredicted RBP20.59■□□□□ 0.89
SIK3-211ENST00000485363 IARSP41252 1262 aaKnown RBP20.59■□□□□ 0.89
SIK3-211ENST00000485363 TRMT112Q9UI30 125 aaKnown RBP20.59■□□□□ 0.89
SIK3-211ENST00000485363 SNED1Q8TER0 1413 aa20.59■□□□□ 0.89
SIK3-211ENST00000485363 SH3TC1Q8TE82 1336 aa20.58■□□□□ 0.89
SIK3-211ENST00000485363 ANP32CO43423 234 aa20.58■□□□□ 0.89
SIK3-211ENST00000485363 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
SIK3-211ENST00000485363 LAMB2P55268 1798 aa20.57■□□□□ 0.88
SIK3-211ENST00000485363 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
SIK3-211ENST00000485363 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
SIK3-211ENST00000485363 CHMP4AQ9BY43 222 aa20.56■□□□□ 0.88
SIK3-211ENST00000485363 IQCA1LA6NCM1 817 aa20.55■□□□□ 0.88
SIK3-211ENST00000485363 HCLS1P14317 486 aaPredicted RBP20.55■□□□□ 0.88
SIK3-211ENST00000485363 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
SIK3-211ENST00000485363 ISCA1Q9BUE6 129 aa20.55■□□□□ 0.88
SIK3-211ENST00000485363 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
SIK3-211ENST00000485363 SCN4AP35499 1836 aa20.55■□□□□ 0.88
SIK3-211ENST00000485363 ABCC4O15439 1325 aa20.54■□□□□ 0.88
SIK3-211ENST00000485363 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
SIK3-211ENST00000485363 CCDC27Q2M243 656 aa20.54■□□□□ 0.88
SIK3-211ENST00000485363 L3MBTL3Q96JM7 780 aaPredicted RBP20.54■□□□□ 0.88
SIK3-211ENST00000485363 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 ATP5J2-PTCD1G3V325 749 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 FZD9O00144 591 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 RIC3Q7Z5B4 369 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 DNAJC5GQ8N7S2 189 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 ATP6V0A2Q9Y487 856 aa20.53■□□□□ 0.88
SIK3-211ENST00000485363 BBOX1O75936 387 aa20.52■□□□□ 0.88
SIK3-211ENST00000485363 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
SIK3-211ENST00000485363 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
SIK3-211ENST00000485363 PHAXQ9H814 394 aaKnown RBP20.52■□□□□ 0.88
SIK3-211ENST00000485363 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
SIK3-211ENST00000485363 HTRA3P83110 453 aa20.51■□□□□ 0.87
SIK3-211ENST00000485363 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
SIK3-211ENST00000485363 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
SIK3-211ENST00000485363 LARGE2Q8N3Y3 721 aa20.51■□□□□ 0.87
SIK3-211ENST00000485363 ZNF428Q96B54 188 aa20.51■□□□□ 0.87
SIK3-211ENST00000485363 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
SIK3-211ENST00000485363 GRAPQ13588 217 aa20.5■□□□□ 0.87
SIK3-211ENST00000485363 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
SIK3-211ENST00000485363 CHADLQ6NUI6 762 aa20.5■□□□□ 0.87
SIK3-211ENST00000485363 SLC51AQ86UW1 340 aa20.5■□□□□ 0.87
SIK3-211ENST00000485363 GPC2Q8N158 579 aa20.5■□□□□ 0.87
SIK3-211ENST00000485363 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
SIK3-211ENST00000485363 EIF6P56537 245 aaKnown RBP20.49■□□□□ 0.87
SIK3-211ENST00000485363 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
SIK3-211ENST00000485363 SUPT20HQ8NEM7 779 aa20.49■□□□□ 0.87
SIK3-211ENST00000485363 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
SIK3-211ENST00000485363 VPS33BQ9H267 617 aa20.49■□□□□ 0.87
SIK3-211ENST00000485363 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
SIK3-211ENST00000485363 HACL1Q9UJ83 578 aa20.49■□□□□ 0.87
SIK3-211ENST00000485363 COL4A5P29400 1685 aa20.48■□□□□ 0.87
SIK3-211ENST00000485363 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
SIK3-211ENST00000485363 TSPYL6Q8N831 410 aa20.48■□□□□ 0.87
SIK3-211ENST00000485363 TAF1P21675 1872 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 POTEIP0CG38 1075 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 POTEJP0CG39 1038 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
SIK3-211ENST00000485363 DPP8Q6V1X1 898 aaPredicted RBP20.47■□□□□ 0.87
SIK3-211ENST00000485363 TMC4Q7Z404 712 aa20.47■□□□□ 0.87
SIK3-211ENST00000485363 LDHDQ86WU2 507 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms