RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 RIC1Q4ADV7 1423 aa17.39■□□□□ 0.38
SOX2-OT-209ENST00000485035 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 ANKRD36CQ5JPF3 1778 aa17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 SRGNP10124 158 aa17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
SOX2-OT-209ENST00000485035 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
SOX2-OT-209ENST00000485035 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
SOX2-OT-209ENST00000485035 TRMT112Q9UI30 125 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-209ENST00000485035 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
SOX2-OT-209ENST00000485035 UTRNP46939 3433 aa17.38■□□□□ 0.37
SOX2-OT-209ENST00000485035 BRCA1P38398 1863 aaKnown RBP17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 FKBP5Q13451 457 aaPredicted RBP17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 TTLL6Q8N841 843 aa17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 ZNF622Q969S3 477 aaKnown RBP eCLIP17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 DLEC1Q9Y238 1755 aa17.37■□□□□ 0.37
SOX2-OT-209ENST00000485035 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 SLC10A5Q5PT55 438 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 ZBED9Q6R2W3 1325 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 SH3TC1Q8TE82 1336 aa17.36■□□□□ 0.37
SOX2-OT-209ENST00000485035 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
SOX2-OT-209ENST00000485035 NPR1P16066 1061 aa17.35■□□□□ 0.37
SOX2-OT-209ENST00000485035 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-209ENST00000485035 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
SOX2-OT-209ENST00000485035 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
SOX2-OT-209ENST00000485035 CWF19L2Q2TBE0 894 aaKnown RBP17.34■□□□□ 0.37
SOX2-OT-209ENST00000485035 CCDC191Q8NCU4 936 aa17.34■□□□□ 0.37
SOX2-OT-209ENST00000485035 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
SOX2-OT-209ENST00000485035 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
SOX2-OT-209ENST00000485035 F6X3S4 739 aa17.33■□□□□ 0.36
SOX2-OT-209ENST00000485035 RTL5Q5HYW3 569 aaPredicted RBP17.33■□□□□ 0.36
SOX2-OT-209ENST00000485035 PRPF40BQ6NWY9 871 aaKnown RBP17.33■□□□□ 0.36
SOX2-OT-209ENST00000485035 CNKSR1Q969H4 720 aa17.33■□□□□ 0.36
SOX2-OT-209ENST00000485035 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
SOX2-OT-209ENST00000485035 NEXNQ0ZGT2 675 aa17.32■□□□□ 0.36
SOX2-OT-209ENST00000485035 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
SOX2-OT-209ENST00000485035 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
SOX2-OT-209ENST00000485035 NLRP3Q96P20 1036 aa17.32■□□□□ 0.36
SOX2-OT-209ENST00000485035 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
SOX2-OT-209ENST00000485035 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
SOX2-OT-209ENST00000485035 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
SOX2-OT-209ENST00000485035 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
SOX2-OT-209ENST00000485035 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
SOX2-OT-209ENST00000485035 C21orf2O43822 256 aa17.3■□□□□ 0.36
SOX2-OT-209ENST00000485035 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
SOX2-OT-209ENST00000485035 RPGRQ92834 1020 aaKnown RBP17.3■□□□□ 0.36
SOX2-OT-209ENST00000485035 SMC4Q9NTJ3 1288 aa17.3■□□□□ 0.36
SOX2-OT-209ENST00000485035 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
SOX2-OT-209ENST00000485035 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 YY1P25490 414 aa17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 BEND3Q5T5X7 828 aa17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
SOX2-OT-209ENST00000485035 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
SOX2-OT-209ENST00000485035 GCKRQ14397 625 aa17.28■□□□□ 0.36
SOX2-OT-209ENST00000485035 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
SOX2-OT-209ENST00000485035 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 ABCC4O15439 1325 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 PTPRCP08575 1304 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 CDHR2Q9BYE9 1310 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 RASSF7Q02833 373 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 OLFM4Q6UX06 510 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
SOX2-OT-209ENST00000485035 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 H7C1W4 665 aa17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 NFKBIEO00221 500 aa17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 BRPF1P55201 1214 aaPredicted RBP17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 SF3B3Q15393 1217 aaKnown RBP17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
SOX2-OT-209ENST00000485035 PRELPP51888 382 aa17.25■□□□□ 0.35
SOX2-OT-209ENST00000485035 CASP7P55210 303 aa17.25■□□□□ 0.35
SOX2-OT-209ENST00000485035 LAMB2P55268 1798 aa17.25■□□□□ 0.35
SOX2-OT-209ENST00000485035 CACNA1FO60840 1977 aa17.24■□□□□ 0.35
SOX2-OT-209ENST00000485035 PDE8AO60658 829 aa17.24■□□□□ 0.35
SOX2-OT-209ENST00000485035 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
SOX2-OT-209ENST00000485035 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 PPEF1O14829 653 aaPredicted RBP17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 COL4A1P02462 1669 aa17.23■□□□□ 0.35
SOX2-OT-209ENST00000485035 BCAR3O75815 825 aa17.22■□□□□ 0.35
SOX2-OT-209ENST00000485035 CTSWP56202 376 aa17.22■□□□□ 0.35
SOX2-OT-209ENST00000485035 GRAPQ13588 217 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms