RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 MRPL50Q8N5N7 158 aaKnown RBP23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 ADCY9O60503 1353 aa23.11■■□□□ 1.29
CNKSR1-208ENST00000484874 GRIN3BO60391 1043 aa23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 BRPF1P55201 1214 aaPredicted RBP23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 NUTM1Q86Y26 1132 aa23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 SSH1Q8WYL5 1049 aa23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 MYD88Q99836 296 aa23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
CNKSR1-208ENST00000484874 ANKRD36CQ5JPF3 1778 aa23.09■■□□□ 1.29
CNKSR1-208ENST00000484874 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
CNKSR1-208ENST00000484874 SRGNP10124 158 aa23.09■■□□□ 1.29
CNKSR1-208ENST00000484874 NEXNQ0ZGT2 675 aa23.09■■□□□ 1.29
CNKSR1-208ENST00000484874 N4BP2Q86UW6 1770 aaPredicted RBP23.09■■□□□ 1.29
CNKSR1-208ENST00000484874 YBX3P16989 372 aaKnown RBP eCLIP23.08■■□□□ 1.29
CNKSR1-208ENST00000484874 STYK1Q6J9G0 422 aa23.08■■□□□ 1.29
CNKSR1-208ENST00000484874 DNAAF4Q8WXU2 420 aa23.08■■□□□ 1.29
CNKSR1-208ENST00000484874 ARFGEF2Q9Y6D5 1785 aa23.08■■□□□ 1.29
CNKSR1-208ENST00000484874 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.28
CNKSR1-208ENST00000484874 ANKRD31Q8N7Z5 1873 aa23.07■■□□□ 1.28
CNKSR1-208ENST00000484874 DALRD3Q5D0E6 543 aaKnown RBP23.07■■□□□ 1.28
CNKSR1-208ENST00000484874 TTLL6Q8N841 843 aa23.07■■□□□ 1.28
CNKSR1-208ENST00000484874 MASTLQ96GX5 879 aa23.07■■□□□ 1.28
CNKSR1-208ENST00000484874 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 ZBTB38Q8NAP3 1195 aaPredicted RBP23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 NLRP3Q96P20 1036 aa23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 CWC25Q9NXE8 425 aaPredicted RBP23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 PTPRCP08575 1304 aa23.06■■□□□ 1.28
CNKSR1-208ENST00000484874 NPR1P16066 1061 aa23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 RARSP54136 660 aaKnown RBP23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 PELP1Q8IZL8 1130 aaKnown RBP23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 CNKSR1Q969H4 720 aa23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 BCS1LQ9Y276 419 aa23.05■■□□□ 1.28
CNKSR1-208ENST00000484874 ABCC12Q96J65 1359 aa23.04■■□□□ 1.28
CNKSR1-208ENST00000484874 PCCAP05165 728 aaPredicted RBP23.04■■□□□ 1.28
CNKSR1-208ENST00000484874 HSP90B1P14625 803 aaKnown RBP23.04■■□□□ 1.28
CNKSR1-208ENST00000484874 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
CNKSR1-208ENST00000484874 FAM89AQ96GI7 184 aa23.04■■□□□ 1.28
CNKSR1-208ENST00000484874 BRCA1P38398 1863 aaKnown RBP23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 NEURL1BA8MQ27 555 aa23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 ALDH1B1P30837 517 aa23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 HOXA10P31260 410 aaPredicted RBP23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 SYNE4Q8N205 404 aa23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 SMC4Q9NTJ3 1288 aa23.03■■□□□ 1.28
CNKSR1-208ENST00000484874 GOLGB1Q14789 3259 aaKnown RBP23.02■■□□□ 1.28
CNKSR1-208ENST00000484874 F6X3S4 739 aa23.02■■□□□ 1.28
CNKSR1-208ENST00000484874 HCLS1P14317 486 aaPredicted RBP23.01■■□□□ 1.27
CNKSR1-208ENST00000484874 BEND3Q5T5X7 828 aa23.01■■□□□ 1.27
CNKSR1-208ENST00000484874 DLEC1Q9Y238 1755 aa23.01■■□□□ 1.27
CNKSR1-208ENST00000484874 H7C1W4 665 aa23■■□□□ 1.27
CNKSR1-208ENST00000484874 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
CNKSR1-208ENST00000484874 GCKRQ14397 625 aa23■■□□□ 1.27
CNKSR1-208ENST00000484874 CWF19L2Q2TBE0 894 aaKnown RBP23■■□□□ 1.27
CNKSR1-208ENST00000484874 CRAMP1Q96RY5 1269 aa23■■□□□ 1.27
CNKSR1-208ENST00000484874 BCL2L13Q9BXK5 485 aa23■■□□□ 1.27
CNKSR1-208ENST00000484874 WWC3Q9ULE0 1092 aa23■■□□□ 1.27
CNKSR1-208ENST00000484874 SF3B3Q15393 1217 aaKnown RBP22.99■■□□□ 1.27
CNKSR1-208ENST00000484874 ARHGAP45Q92619 1136 aa22.99■■□□□ 1.27
CNKSR1-208ENST00000484874 CDHR2Q9BYE9 1310 aa22.99■■□□□ 1.27
CNKSR1-208ENST00000484874 ALDH1L1O75891 902 aa22.98■■□□□ 1.27
CNKSR1-208ENST00000484874 RPGRQ92834 1020 aaKnown RBP22.98■■□□□ 1.27
CNKSR1-208ENST00000484874 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
CNKSR1-208ENST00000484874 C3orf67Q6ZVT6 689 aa22.97■■□□□ 1.27
CNKSR1-208ENST00000484874 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
CNKSR1-208ENST00000484874 PDE8AO60658 829 aa22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 PRPF40BQ6NWY9 871 aaKnown RBP22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 C7orf43Q8WVR3 580 aa22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 SRCIN1Q9C0H9 1055 aa22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
CNKSR1-208ENST00000484874 UTRNP46939 3433 aa22.95■■□□□ 1.27
CNKSR1-208ENST00000484874 COL11A2P13942 1736 aaPredicted RBP22.95■■□□□ 1.26
CNKSR1-208ENST00000484874 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 IPO8O15397 1037 aaKnown RBP22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 CASP7P55210 303 aa22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 SOGA3Q5TF21 947 aa22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 SLC4A10Q6U841 1118 aa22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 ARHGAP27Q6ZUM4 889 aa22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 API5Q9BZZ5 524 aaKnown RBP22.94■■□□□ 1.26
CNKSR1-208ENST00000484874 TNRC6CQ9HCJ0 1690 aaKnown RBP22.93■■□□□ 1.26
CNKSR1-208ENST00000484874 BBOX1O75936 387 aa22.93■■□□□ 1.26
CNKSR1-208ENST00000484874 DDX46Q7L014 1031 aaKnown RBP22.93■■□□□ 1.26
CNKSR1-208ENST00000484874 PLA2G12BQ9BX93 195 aa22.93■■□□□ 1.26
CNKSR1-208ENST00000484874 C21orf2O43822 256 aa22.92■■□□□ 1.26
CNKSR1-208ENST00000484874 BCAR3O75815 825 aa22.92■■□□□ 1.26
CNKSR1-208ENST00000484874 JARID2Q92833 1246 aaPredicted RBP22.92■■□□□ 1.26
CNKSR1-208ENST00000484874 SLX4Q8IY92 1834 aa22.92■■□□□ 1.26
CNKSR1-208ENST00000484874 CC2D2BQ6DHV5 1058 aa22.91■■□□□ 1.26
CNKSR1-208ENST00000484874 UBE3BQ7Z3V4 1068 aa22.91■■□□□ 1.26
CNKSR1-208ENST00000484874 DDX60Q8IY21 1712 aaKnown RBP22.91■■□□□ 1.26
CNKSR1-208ENST00000484874 GRM8O00222 908 aa22.9■■□□□ 1.26
CNKSR1-208ENST00000484874 GRIPAP1Q4V328 841 aa22.9■■□□□ 1.26
CNKSR1-208ENST00000484874 UTYO14607 1347 aa22.89■■□□□ 1.26
CNKSR1-208ENST00000484874 CCT4P50991 539 aaKnown RBP22.89■■□□□ 1.25
CNKSR1-208ENST00000484874 GRAPQ13588 217 aa22.89■■□□□ 1.25
CNKSR1-208ENST00000484874 CCDC152Q4G0S7 254 aa22.89■■□□□ 1.25
CNKSR1-208ENST00000484874 TMC4Q7Z404 712 aa22.89■■□□□ 1.25
CNKSR1-208ENST00000484874 GRAPLQ8TC17 118 aaPredicted RBP22.89■■□□□ 1.25
CNKSR1-208ENST00000484874 C9orf78Q9NZ63 289 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms