RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
HLA-DQB1-208ENST00000484729 EPS15P42566 896 aa20.41■□□□□ 0.86
HLA-DQB1-208ENST00000484729 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
HLA-DQB1-208ENST00000484729 PSMD1Q99460 953 aa20.41■□□□□ 0.86
HLA-DQB1-208ENST00000484729 TRAF5O00463 557 aa20.4■□□□□ 0.86
HLA-DQB1-208ENST00000484729 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
HLA-DQB1-208ENST00000484729 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
HLA-DQB1-208ENST00000484729 ABCC12Q96J65 1359 aa20.4■□□□□ 0.86
HLA-DQB1-208ENST00000484729 TSKSQ9UJT2 592 aa20.4■□□□□ 0.86
HLA-DQB1-208ENST00000484729 SCNN1DP51172 638 aa20.39■□□□□ 0.85
HLA-DQB1-208ENST00000484729 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
HLA-DQB1-208ENST00000484729 CST9Q5W186 159 aa20.39■□□□□ 0.85
HLA-DQB1-208ENST00000484729 GPR101Q96P66 508 aaPredicted RBP20.39■□□□□ 0.85
HLA-DQB1-208ENST00000484729 CRY2Q49AN0 593 aa20.38■□□□□ 0.85
HLA-DQB1-208ENST00000484729 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
HLA-DQB1-208ENST00000484729 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
HLA-DQB1-208ENST00000484729 BEGAINQ9BUH8 593 aa20.38■□□□□ 0.85
HLA-DQB1-208ENST00000484729 TCERG1O14776 1098 aaKnown RBP20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 RGL2O15211 777 aa20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 ECE1P42892 770 aa20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 MLLT1Q03111 559 aaPredicted RBP20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 LARGE2Q8N3Y3 721 aa20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 THSD7BQ9C0I4 1608 aa20.37■□□□□ 0.85
HLA-DQB1-208ENST00000484729 AOC2O75106 756 aa20.36■□□□□ 0.85
HLA-DQB1-208ENST00000484729 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
HLA-DQB1-208ENST00000484729 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
HLA-DQB1-208ENST00000484729 CC2D2BQ6DHV5 1058 aa20.34■□□□□ 0.85
HLA-DQB1-208ENST00000484729 NYXQ9GZU5 481 aa20.34■□□□□ 0.85
HLA-DQB1-208ENST00000484729 TLL2Q9Y6L7 1015 aa20.34■□□□□ 0.85
HLA-DQB1-208ENST00000484729 GPTP24298 496 aa20.33■□□□□ 0.85
HLA-DQB1-208ENST00000484729 RGS19P49795 217 aa20.33■□□□□ 0.85
HLA-DQB1-208ENST00000484729 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
HLA-DQB1-208ENST00000484729 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB1-208ENST00000484729 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
HLA-DQB1-208ENST00000484729 TRPM7Q96QT4 1865 aa20.31■□□□□ 0.84
HLA-DQB1-208ENST00000484729 PPEF1O14829 653 aaPredicted RBP20.31■□□□□ 0.84
HLA-DQB1-208ENST00000484729 TTLL7Q6ZT98 887 aa20.31■□□□□ 0.84
HLA-DQB1-208ENST00000484729 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
HLA-DQB1-208ENST00000484729 UBN2Q6ZU65 1347 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 ERVV-1B6SEH8 477 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 NEFMP07197 916 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 TAF7Q15545 349 aaPredicted RBP20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 AOC3Q16853 763 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 SUSD4Q5VX71 490 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 C3orf67Q6ZVT6 689 aa20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
HLA-DQB1-208ENST00000484729 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 PPIP5K2O43314 1243 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 CELF2O95319 508 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 MAP2K2P36507 400 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 SAPCD2Q86UD0 394 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 MCOLN1Q9GZU1 580 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 ZBTB3Q9H5J0 574 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 ADARB2Q9NS39 739 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 GPRC5DQ9NZD1 345 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 NUP98P52948 1817 aa20.29■□□□□ 0.84
HLA-DQB1-208ENST00000484729 MYL6BP14649 208 aa20.28■□□□□ 0.84
HLA-DQB1-208ENST00000484729 CRAMP1Q96RY5 1269 aa20.28■□□□□ 0.84
HLA-DQB1-208ENST00000484729 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-208ENST00000484729 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
HLA-DQB1-208ENST00000484729 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
HLA-DQB1-208ENST00000484729 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
HLA-DQB1-208ENST00000484729 KIF6Q6ZMV9 814 aa20.27■□□□□ 0.84
HLA-DQB1-208ENST00000484729 CXCL9Q07325 125 aa20.26■□□□□ 0.83
HLA-DQB1-208ENST00000484729 ZNF408Q9H9D4 720 aa20.26■□□□□ 0.83
HLA-DQB1-208ENST00000484729 NTSR2O95665 410 aa20.25■□□□□ 0.83
HLA-DQB1-208ENST00000484729 GMPSP49915 693 aaPredicted RBP20.25■□□□□ 0.83
HLA-DQB1-208ENST00000484729 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
HLA-DQB1-208ENST00000484729 ZNF34Q8IZ26 560 aa20.24■□□□□ 0.83
HLA-DQB1-208ENST00000484729 ZNRF3Q9ULT6 936 aa20.24■□□□□ 0.83
HLA-DQB1-208ENST00000484729 IBTKQ9P2D0 1353 aaPredicted RBP20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 TNRC18O15417 2968 aaPredicted RBP20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 CA12O43570 354 aa20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 DGKZQ13574 1117 aa20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 CIAPIN1Q6FI81 312 aa20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 ATP6V0A2Q9Y487 856 aa20.23■□□□□ 0.83
HLA-DQB1-208ENST00000484729 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 EIF4A1P60842 406 aaKnown RBP20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 ZIC5Q96T25 663 aa20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 TMX4Q9H1E5 349 aaPredicted RBP20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
HLA-DQB1-208ENST00000484729 SHTN1A0MZ66 631 aa20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 RAD17O75943 681 aa20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 PNISRQ8TF01 805 aaKnown RBP20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 HHIPL1Q96JK4 782 aa20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 PGAP2Q9UHJ9 254 aa20.21■□□□□ 0.83
HLA-DQB1-208ENST00000484729 NFE2L2Q16236 605 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 DLK2Q6UY11 383 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 GIGYF2Q6Y7W6 1299 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 TRPM4Q8TD43 1214 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 PLEKHF1Q96S99 279 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 VPS33BQ9H267 617 aa20.2■□□□□ 0.82
HLA-DQB1-208ENST00000484729 ABCC4O15439 1325 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms