RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 HHIPL1Q96JK4 782 aa24.38■■□□□ 1.49
DDR1-245ENST00000484556 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
DDR1-245ENST00000484556 ADARB2Q9NS39 739 aaKnown RBP24.37■■□□□ 1.49
DDR1-245ENST00000484556 USP16Q9Y5T5 823 aa24.37■■□□□ 1.49
DDR1-245ENST00000484556 ABCC12Q96J65 1359 aa24.37■■□□□ 1.49
DDR1-245ENST00000484556 GPRC5DQ9NZD1 345 aa24.36■■□□□ 1.49
DDR1-245ENST00000484556 GTF2E1P29083 439 aaPredicted RBP24.34■■□□□ 1.49
DDR1-245ENST00000484556 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
DDR1-245ENST00000484556 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
DDR1-245ENST00000484556 TCERG1O14776 1098 aaKnown RBP24.33■■□□□ 1.49
DDR1-245ENST00000484556 NOGQ13253 232 aa24.33■■□□□ 1.49
DDR1-245ENST00000484556 CC2D2BQ6DHV5 1058 aa24.33■■□□□ 1.49
DDR1-245ENST00000484556 CRY2Q49AN0 593 aa24.32■■□□□ 1.48
DDR1-245ENST00000484556 NUTM1Q86Y26 1132 aa24.32■■□□□ 1.48
DDR1-245ENST00000484556 HLFQ16534 295 aa24.31■■□□□ 1.48
DDR1-245ENST00000484556 NPC1L1Q9UHC9 1359 aa24.3■■□□□ 1.48
DDR1-245ENST00000484556 BTBD11A6QL63 1104 aa24.3■■□□□ 1.48
DDR1-245ENST00000484556 PPIP5K2O43314 1243 aa24.3■■□□□ 1.48
DDR1-245ENST00000484556 GMPSP49915 693 aaPredicted RBP24.3■■□□□ 1.48
DDR1-245ENST00000484556 AOC3Q16853 763 aa24.3■■□□□ 1.48
DDR1-245ENST00000484556 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
DDR1-245ENST00000484556 HUNKP57058 714 aa24.29■■□□□ 1.48
DDR1-245ENST00000484556 RPGRQ92834 1020 aaKnown RBP24.29■■□□□ 1.48
DDR1-245ENST00000484556 KNSTRNQ9Y448 316 aa24.29■■□□□ 1.48
DDR1-245ENST00000484556 NBPF26B4DH59 902 aa24.28■■□□□ 1.48
DDR1-245ENST00000484556 NBPF10Q6P3W6 841 aaKnown RBP24.28■■□□□ 1.48
DDR1-245ENST00000484556 DLK2Q6UY11 383 aa24.28■■□□□ 1.48
DDR1-245ENST00000484556 NBPF15Q8N660 670 aa24.28■■□□□ 1.48
DDR1-245ENST00000484556 PPEF1O14829 653 aaPredicted RBP24.27■■□□□ 1.48
DDR1-245ENST00000484556 HIRAP54198 1017 aaPredicted RBP24.27■■□□□ 1.48
DDR1-245ENST00000484556 CXCL9Q07325 125 aa24.27■■□□□ 1.48
DDR1-245ENST00000484556 GAS2L2Q8NHY3 880 aa24.27■■□□□ 1.48
DDR1-245ENST00000484556 TRPM4Q8TD43 1214 aa24.27■■□□□ 1.48
DDR1-245ENST00000484556 PGAP2Q9UHJ9 254 aa24.27■■□□□ 1.48
DDR1-245ENST00000484556 CEMIPQ8WUJ3 1361 aa24.27■■□□□ 1.48
DDR1-245ENST00000484556 RIC1Q4ADV7 1423 aa24.26■■□□□ 1.47
DDR1-245ENST00000484556 AKAP11Q9UKA4 1901 aa24.25■■□□□ 1.47
DDR1-245ENST00000484556 CDC37L1Q7L3B6 337 aa24.25■■□□□ 1.47
DDR1-245ENST00000484556 SAGE1Q9NXZ1 904 aa24.25■■□□□ 1.47
DDR1-245ENST00000484556 NUP98P52948 1817 aa24.24■■□□□ 1.47
DDR1-245ENST00000484556 FAM155AB1AL88 458 aaPredicted RBP24.24■■□□□ 1.47
DDR1-245ENST00000484556 TRPA1O75762 1119 aa24.24■■□□□ 1.47
DDR1-245ENST00000484556 HOXA10P31260 410 aaPredicted RBP24.24■■□□□ 1.47
DDR1-245ENST00000484556 SHTN1A0MZ66 631 aa24.23■■□□□ 1.47
DDR1-245ENST00000484556 RGL2O15211 777 aa24.23■■□□□ 1.47
DDR1-245ENST00000484556 KIF23Q02241 960 aaPredicted RBP24.23■■□□□ 1.47
DDR1-245ENST00000484556 GRIPAP1Q4V328 841 aa24.23■■□□□ 1.47
DDR1-245ENST00000484556 AMER1Q5JTC6 1135 aaPredicted RBP24.23■■□□□ 1.47
DDR1-245ENST00000484556 USP48Q86UV5 1035 aa24.23■■□□□ 1.47
DDR1-245ENST00000484556 RNF186Q9NXI6 227 aa24.23■■□□□ 1.47
DDR1-245ENST00000484556 SNRPA1P09661 255 aaKnown RBP24.22■■□□□ 1.47
DDR1-245ENST00000484556 NYXQ9GZU5 481 aa24.22■■□□□ 1.47
DDR1-245ENST00000484556 ZNRF3Q9ULT6 936 aa24.22■■□□□ 1.47
DDR1-245ENST00000484556 COL3A1P02461 1466 aaPredicted RBP24.21■■□□□ 1.47
DDR1-245ENST00000484556 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
DDR1-245ENST00000484556 RGMBQ6NW40 437 aa24.21■■□□□ 1.47
DDR1-245ENST00000484556 CTU1Q7Z7A3 348 aaKnown RBP24.21■■□□□ 1.47
DDR1-245ENST00000484556 ZC3H15Q8WU90 426 aaKnown RBP24.21■■□□□ 1.47
DDR1-245ENST00000484556 BCL2L13Q9BXK5 485 aa24.21■■□□□ 1.47
DDR1-245ENST00000484556 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
DDR1-245ENST00000484556 C3orf67Q6ZVT6 689 aa24.2■■□□□ 1.46
DDR1-245ENST00000484556 RBM17Q96I25 401 aaKnown RBP24.2■■□□□ 1.46
DDR1-245ENST00000484556 HPS5Q9UPZ3 1129 aa24.2■■□□□ 1.46
DDR1-245ENST00000484556 LAMB4A4D0S4 1761 aa24.2■■□□□ 1.46
DDR1-245ENST00000484556 RAD17O75943 681 aa24.19■■□□□ 1.46
DDR1-245ENST00000484556 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
DDR1-245ENST00000484556 NGEFQ8N5V2 710 aa24.19■■□□□ 1.46
DDR1-245ENST00000484556 CRAMP1Q96RY5 1269 aa24.19■■□□□ 1.46
DDR1-245ENST00000484556 CDHR2Q9BYE9 1310 aa24.18■■□□□ 1.46
DDR1-245ENST00000484556 GPTP24298 496 aa24.18■■□□□ 1.46
DDR1-245ENST00000484556 UBN2Q6ZU65 1347 aa24.17■■□□□ 1.46
DDR1-245ENST00000484556 GBA2Q9HCG7 927 aaPredicted RBP24.17■■□□□ 1.46
DDR1-245ENST00000484556 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
DDR1-245ENST00000484556 ZNF157P51786 506 aaPredicted RBP24.15■■□□□ 1.46
DDR1-245ENST00000484556 PHACTR3Q96KR7 559 aa24.15■■□□□ 1.46
DDR1-245ENST00000484556 CNOT7Q9UIV1 285 aaKnown RBP24.15■■□□□ 1.46
DDR1-245ENST00000484556 SUSD4Q5VX71 490 aa24.14■■□□□ 1.45
DDR1-245ENST00000484556 MICALL2Q8IY33 904 aa24.14■■□□□ 1.45
DDR1-245ENST00000484556 CCDC102AQ96A19 550 aa24.14■■□□□ 1.45
DDR1-245ENST00000484556 TMX4Q9H1E5 349 aaPredicted RBP24.14■■□□□ 1.45
DDR1-245ENST00000484556 ATP6V0A2Q9Y487 856 aa24.14■■□□□ 1.45
DDR1-245ENST00000484556 IBTKQ9P2D0 1353 aaPredicted RBP24.14■■□□□ 1.45
DDR1-245ENST00000484556 ADM5C9JUS6 153 aa24.13■■□□□ 1.45
DDR1-245ENST00000484556 EIF4G2P78344 907 aaKnown RBP eCLIP24.13■■□□□ 1.45
DDR1-245ENST00000484556 C2orf69Q8N8R5 385 aa24.13■■□□□ 1.45
DDR1-245ENST00000484556 CSRNP1Q96S65 589 aa24.13■■□□□ 1.45
DDR1-245ENST00000484556 VPS33BQ9H267 617 aa24.13■■□□□ 1.45
DDR1-245ENST00000484556 TNIP1Q15025 636 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 MCM10Q7L590 875 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 SAMD7Q7Z3H4 446 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 KRT26Q7Z3Y9 468 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 SUPT20HQ8NEM7 779 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 GCC1Q96CN9 775 aa24.12■■□□□ 1.45
DDR1-245ENST00000484556 RTFDC1Q9BY42 306 aaPredicted RBP24.12■■□□□ 1.45
DDR1-245ENST00000484556 ABCC4O15439 1325 aa24.11■■□□□ 1.45
DDR1-245ENST00000484556 MAP3K15Q6ZN16 1313 aa24.11■■□□□ 1.45
DDR1-245ENST00000484556 H7C1D1 291 aa24.11■■□□□ 1.45
DDR1-245ENST00000484556 CC2D1BQ5T0F9 858 aaKnown RBP24.11■■□□□ 1.45
DDR1-245ENST00000484556 DPP8Q6V1X1 898 aaPredicted RBP24.11■■□□□ 1.45
DDR1-245ENST00000484556 TTLL7Q6ZT98 887 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms