RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 PI4KAP1Q8N8J0 262 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 LINC00116Q8NCU8 138 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 PANK1Q8TE04 598 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 AK7Q96M32 723 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 METRNQ9UJH8 293 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 ZBTB1Q9Y2K1 713 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 MAP3K2Q9Y2U5 619 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 ZNF330Q9Y3S2 320 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 TUBGCP6Q96RT7 1819 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 SCN7AQ01118 1682 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 TTLL13PA6NNM8 815 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 ERVV-1B6SEH8 477 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 ALDH1L1O75891 902 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 C7P10643 843 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 C20orf194Q5TEA3 1177 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 DZIP3Q86Y13 1208 aaKnown RBP8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 TMEM57Q8N5G2 664 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 LINS1Q8NG48 757 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 ARXQ96QS3 562 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 CRBNQ96SW2 442 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 METTL22Q9BUU2 404 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 SRCIN1Q9C0H9 1055 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 PCDHB8Q9UN66 801 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 ZNF652Q9Y2D9 606 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 MAP3K15Q6ZN16 1313 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 ADCY9O60503 1353 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 COL15A1P39059 1388 aa8.2□□□□□ -1.1
PDZRN3-209ENST00000484487 F6X3S4 739 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 GNPATO15228 680 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 GNAI3P08754 354 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 RLBP1P12271 317 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 PIP4K2AP48426 406 aaPredicted RBP8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 TRAPPC3LQ5T215 181 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 LRRC4BQ9NT99 713 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
PDZRN3-209ENST00000484487 ZPR1O75312 459 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 SSFA2P28290 1259 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 KCNQ4P56696 695 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 BEND3Q5T5X7 828 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 CLEC4GQ6UXB4 293 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 GIGYF2Q6Y7W6 1299 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 EXOC6Q8TAG9 804 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 CAMKK2Q96RR4 588 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 TMEM106CQ9BVX2 250 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 TNNQ9UQP3 1299 aa8.18□□□□□ -1.1
PDZRN3-209ENST00000484487 ZBTB7BO15156 539 aaPredicted RBP8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 RFC4P35249 363 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 EN1Q05925 392 aaPredicted RBP8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 TCIRG1Q13488 830 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 CCDC191Q8NCU4 936 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 MYD88Q99836 296 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 C9orf78Q9NZ63 289 aaPredicted RBP8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 TBC1D2BQ9UPU7 963 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 LAMB2P55268 1798 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 CASZ1Q86V15 1759 aa8.17□□□□□ -1.1
PDZRN3-209ENST00000484487 NEURL1BA8MQ27 555 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 HSP90B1P14625 803 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 EZH2Q15910 746 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 COL24A1Q17RW2 1714 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 PARP10Q53GL7 1025 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 ISCA1Q9BUE6 129 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 ZBTB40Q9NUA8 1239 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 STK32BQ9NY57 414 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 TFCP2L1Q9NZI6 479 aa8.16□□□□□ -1.1
PDZRN3-209ENST00000484487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 GRM8O00222 908 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 CAMTA2O94983 1202 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 GNAI2P04899 355 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 IGKV5-2P06315 115 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 UBTFL1P0CB47 393 aaPredicted RBP8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 GCKRQ14397 625 aa8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 ARHGEF1Q92888 912 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-209ENST00000484487 UTYO14607 1347 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 USP42Q9H9J4 1324 aaKnown RBP8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 ATP5J2-PTCD1G3V325 749 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 PHF14O94880 888 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 SEC24BO95487 1268 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 SLC15A2Q16348 729 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 HLFQ16534 295 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 PPP1R42Q7Z4L9 355 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 RPAP2Q8IXW5 612 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 ZNF34Q8IZ26 560 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 CCDC136Q96JN2 1154 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 USP44Q9H0E7 712 aa8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
PDZRN3-209ENST00000484487 DDX60Q8IY21 1712 aaKnown RBP8.13□□□□□ -1.11
PDZRN3-209ENST00000484487 H7C1W4 665 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms