RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 RSPH3Q86UC2 560 aa10.9□□□□□ -0.67
ALMS1-204ENST00000484298 HAUS8Q9BT25 410 aa10.9□□□□□ -0.67
ALMS1-204ENST00000484298 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.67
ALMS1-204ENST00000484298 OGFRQ9NZT2 677 aa10.9□□□□□ -0.67
ALMS1-204ENST00000484298 HSP90AA5PQ58FG0 334 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 SH2B1Q9NRF2 756 aaPredicted RBP10.89□□□□□ -0.67
ALMS1-204ENST00000484298 MTRF1LQ9UGC7 380 aaKnown RBP10.89□□□□□ -0.67
ALMS1-204ENST00000484298 LIMCH1Q9UPQ0 1083 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 SPTY2D1Q68D10 685 aaPredicted RBP10.89□□□□□ -0.67
ALMS1-204ENST00000484298 LRRC43Q8N309 656 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 TTC39AQ5SRH9 613 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 CCDC30Q5VVM6 783 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 INPP5BP32019 993 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 SATB2Q9UPW6 733 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
ALMS1-204ENST00000484298 STK3Q13188 491 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 ATP6V1AP38606 617 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 VPS52Q8N1B4 723 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 VPS18Q9P253 973 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 INPP1P49441 399 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 LMBR1Q8WVP7 490 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 MPHOSPH9Q99550 1183 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 FAN1Q9Y2M0 1017 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 UVSSAQ2YD98 709 aa10.89□□□□□ -0.67
ALMS1-204ENST00000484298 ADCY5O95622 1261 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 TMC6Q7Z403 805 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 SDCCAG8Q86SQ7 713 aaPredicted RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 BRD2P25440 801 aaKnown RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 ERCC5P28715 1186 aaPredicted RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 SELENOSQ9BQE4 189 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 TRMT1Q9NXH9 659 aaKnown RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 PANK3Q9H999 370 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 GNAI2P04899 355 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 CYLC1P35663 651 aaPredicted RBP10.88□□□□□ -0.67
ALMS1-204ENST00000484298 NLRP5P59047 1200 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 PFDN4Q9NQP4 134 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 TSPYL4Q9UJ04 414 aa10.88□□□□□ -0.67
ALMS1-204ENST00000484298 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 LARSQ9P2J5 1176 aaKnown RBP10.87□□□□□ -0.67
ALMS1-204ENST00000484298 CEP104O60308 925 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 RLBP1P12271 317 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 CLCN1P35523 988 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 GPR161Q8N6U8 529 aaKnown RBP10.87□□□□□ -0.67
ALMS1-204ENST00000484298 TBC1D31Q96DN5 1066 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 GIMAP4Q9NUV9 329 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 CASTP20810 708 aaKnown RBP10.87□□□□□ -0.67
ALMS1-204ENST00000484298 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 RPGRIP1LQ68CZ1 1315 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 FAF1Q9UNN5 650 aaPredicted RBP10.87□□□□□ -0.67
ALMS1-204ENST00000484298 HS1BP3Q53T59 392 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 PANK1Q8TE04 598 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
ALMS1-204ENST00000484298 CLUL1Q15846 466 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 SMARCC2Q8TAQ2 1214 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 BACH2Q9BYV9 841 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 KRT86O43790 486 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 TSGA10Q9BZW7 698 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 SMIM24O75264 130 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 SYNCQ9H7C4 482 aa10.87□□□□□ -0.67
ALMS1-204ENST00000484298 SYF2O95926 243 aaKnown RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CROCCP2Q86T23 111 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 RPAINQ86UA6 219 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 GABPB2Q8TAK5 448 aaPredicted RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 PPFIA1Q13136 1202 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CXorf38Q8TB03 319 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 SLC8A1P32418 973 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 AFAP1L1Q8TED9 768 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 MTIF2P46199 727 aaKnown RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 RAP1GDS1P52306 607 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CNTLNQ9NXG0 1405 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 APAF1O14727 1248 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 KRT13P13646 458 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 GSTA5Q7RTV2 222 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 HDAC9Q9UKV0 1011 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 GABPB1Q06547 395 aaPredicted RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 KRBA2Q6ZNG9 492 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CACYBPQ9HB71 228 aaKnown RBP10.86□□□□□ -0.67
ALMS1-204ENST00000484298 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 CCDC89Q8N998 374 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
ALMS1-204ENST00000484298 FCHSD2O94868 740 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 GAS8O95995 478 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 ATP6V1E1P36543 226 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 PHLDB3Q6NSJ2 640 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 SPATS2Q86XZ4 545 aaKnown RBP10.85□□□□□ -0.67
ALMS1-204ENST00000484298 USP6NLQ92738 828 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 ZNF622Q969S3 477 aaKnown RBP eCLIP10.85□□□□□ -0.67
ALMS1-204ENST00000484298 EHMT1Q9H9B1 1298 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 CRCPO75575 148 aa10.85□□□□□ -0.67
ALMS1-204ENST00000484298 LRRC23Q53EV4 343 aaPredicted RBP10.85□□□□□ -0.67
ALMS1-204ENST00000484298 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms