RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 TRIM28Q13263 835 aaKnown RBP34.14■■■■□ 3.06
SMDT1-203ENST00000484235 KSR2Q6VAB6 950 aa34.14■■■■□ 3.06
SMDT1-203ENST00000484235 G2E3Q7L622 706 aa34.14■■■■□ 3.06
SMDT1-203ENST00000484235 RNF123Q5XPI4 1314 aa34.12■■■■□ 3.05
SMDT1-203ENST00000484235 ATP5J2-PTCD1G3V325 749 aa34.12■■■■□ 3.05
SMDT1-203ENST00000484235 SRGNP10124 158 aa34.12■■■■□ 3.05
SMDT1-203ENST00000484235 TTLL6Q8N841 843 aa34.12■■■■□ 3.05
SMDT1-203ENST00000484235 ZNF622Q969S3 477 aaKnown RBP eCLIP34.12■■■■□ 3.05
SMDT1-203ENST00000484235 PI4KAP2A4QPH2 592 aa34.11■■■■□ 3.05
SMDT1-203ENST00000484235 KIF3CO14782 793 aa34.11■■■■□ 3.05
SMDT1-203ENST00000484235 FLIIQ13045 1269 aa34.11■■■■□ 3.05
SMDT1-203ENST00000484235 PI4KAP1Q8N8J0 262 aa34.11■■■■□ 3.05
SMDT1-203ENST00000484235 METTL22Q9BUU2 404 aaPredicted RBP34.11■■■■□ 3.05
SMDT1-203ENST00000484235 TRMT112Q9UI30 125 aaKnown RBP34.11■■■■□ 3.05
SMDT1-203ENST00000484235 MAP3K2Q9Y2U5 619 aa34.11■■■■□ 3.05
SMDT1-203ENST00000484235 ANKRD31Q8N7Z5 1873 aa34.1■■■■□ 3.05
SMDT1-203ENST00000484235 SLC10A5Q5PT55 438 aa34.1■■■■□ 3.05
SMDT1-203ENST00000484235 STYK1Q6J9G0 422 aa34.1■■■■□ 3.05
SMDT1-203ENST00000484235 MASTLQ96GX5 879 aa34.1■■■■□ 3.05
SMDT1-203ENST00000484235 MYD88Q99836 296 aa34.09■■■■□ 3.05
SMDT1-203ENST00000484235 HSPA6P17066 643 aa34.08■■■■□ 3.05
SMDT1-203ENST00000484235 ZNF428Q96B54 188 aa34.08■■■■□ 3.05
SMDT1-203ENST00000484235 ABCC12Q96J65 1359 aa34.08■■■■□ 3.05
SMDT1-203ENST00000484235 NPR1P16066 1061 aa34.07■■■■□ 3.04
SMDT1-203ENST00000484235 CNKSR1Q969H4 720 aa34.07■■■■□ 3.04
SMDT1-203ENST00000484235 RIC1Q4ADV7 1423 aa34.06■■■■□ 3.04
SMDT1-203ENST00000484235 FKBP5Q13451 457 aaPredicted RBP34.06■■■■□ 3.04
SMDT1-203ENST00000484235 SH3TC1Q8TE82 1336 aa34.05■■■■□ 3.04
SMDT1-203ENST00000484235 BRCA1P38398 1863 aaKnown RBP34.05■■■■□ 3.04
SMDT1-203ENST00000484235 CRY2Q49AN0 593 aa34.05■■■■□ 3.04
SMDT1-203ENST00000484235 CCDC191Q8NCU4 936 aa34.05■■■■□ 3.04
SMDT1-203ENST00000484235 ANKRD36CQ5JPF3 1778 aa34.05■■■■□ 3.04
SMDT1-203ENST00000484235 NLRP3Q96P20 1036 aa34.04■■■■□ 3.04
SMDT1-203ENST00000484235 CT47B1P0C2W7 299 aaPredicted RBP34.03■■■■□ 3.04
SMDT1-203ENST00000484235 NEXNQ0ZGT2 675 aa34.03■■■■□ 3.04
SMDT1-203ENST00000484235 ARHGAP27Q6ZUM4 889 aa34.03■■■■□ 3.04
SMDT1-203ENST00000484235 ARFGEF2Q9Y6D5 1785 aa34.03■■■■□ 3.04
SMDT1-203ENST00000484235 SYNE4Q8N205 404 aa34.02■■■■□ 3.04
SMDT1-203ENST00000484235 FAM89AQ96GI7 184 aa34.01■■■■□ 3.03
SMDT1-203ENST00000484235 CWC25Q9NXE8 425 aaPredicted RBP34.01■■■■□ 3.03
SMDT1-203ENST00000484235 DLEC1Q9Y238 1755 aa34■■■■□ 3.03
SMDT1-203ENST00000484235 CACNA1FO60840 1977 aa34■■■■□ 3.03
SMDT1-203ENST00000484235 ALDH1B1P30837 517 aa34■■■■□ 3.03
SMDT1-203ENST00000484235 IGKV5-2P06315 115 aa33.99■■■■□ 3.03
SMDT1-203ENST00000484235 HCLS1P14317 486 aaPredicted RBP33.99■■■■□ 3.03
SMDT1-203ENST00000484235 HOXA10P31260 410 aaPredicted RBP33.99■■■■□ 3.03
SMDT1-203ENST00000484235 ZBTB38Q8NAP3 1195 aaPredicted RBP33.99■■■■□ 3.03
SMDT1-203ENST00000484235 DNAAF4Q8WXU2 420 aa33.99■■■■□ 3.03
SMDT1-203ENST00000484235 RPGRQ92834 1020 aaKnown RBP33.99■■■■□ 3.03
SMDT1-203ENST00000484235 ALDH1L2Q3SY69 923 aa33.98■■■■□ 3.03
SMDT1-203ENST00000484235 PRPF40BQ6NWY9 871 aaKnown RBP33.98■■■■□ 3.03
SMDT1-203ENST00000484235 MRPL50Q8N5N7 158 aaKnown RBP33.98■■■■□ 3.03
SMDT1-203ENST00000484235 SSH1Q8WYL5 1049 aa33.98■■■■□ 3.03
SMDT1-203ENST00000484235 COL11A2P13942 1736 aaPredicted RBP33.97■■■■□ 3.03
SMDT1-203ENST00000484235 C3orf67Q6ZVT6 689 aa33.97■■■■□ 3.03
SMDT1-203ENST00000484235 ZBED9Q6R2W3 1325 aa33.97■■■■□ 3.03
SMDT1-203ENST00000484235 RBM17Q96I25 401 aaKnown RBP33.95■■■■□ 3.03
SMDT1-203ENST00000484235 ARFGEF1Q9Y6D6 1849 aa33.95■■■■□ 3.02
SMDT1-203ENST00000484235 NEURL1BA8MQ27 555 aa33.94■■■■□ 3.02
SMDT1-203ENST00000484235 C21orf2O43822 256 aa33.94■■■■□ 3.02
SMDT1-203ENST00000484235 PCCAP05165 728 aaPredicted RBP33.94■■■■□ 3.02
SMDT1-203ENST00000484235 HSP90B1P14625 803 aaKnown RBP33.94■■■■□ 3.02
SMDT1-203ENST00000484235 RTL5Q5HYW3 569 aaPredicted RBP33.94■■■■□ 3.02
SMDT1-203ENST00000484235 TNRC6CQ9HCJ0 1690 aaKnown RBP33.93■■■■□ 3.02
SMDT1-203ENST00000484235 IRS4O14654 1257 aaPredicted RBP33.93■■■■□ 3.02
SMDT1-203ENST00000484235 CWF19L2Q2TBE0 894 aaKnown RBP33.93■■■■□ 3.02
SMDT1-203ENST00000484235 LINS1Q8NG48 757 aa33.93■■■■□ 3.02
SMDT1-203ENST00000484235 CRAMP1Q96RY5 1269 aa33.93■■■■□ 3.02
SMDT1-203ENST00000484235 F6X3S4 739 aa33.92■■■■□ 3.02
SMDT1-203ENST00000484235 ZNF219Q9P2Y4 722 aaPredicted RBP33.92■■■■□ 3.02
SMDT1-203ENST00000484235 SOGA3Q5TF21 947 aa33.91■■■■□ 3.02
SMDT1-203ENST00000484235 C7orf43Q8WVR3 580 aa33.91■■■■□ 3.02
SMDT1-203ENST00000484235 NMRK2Q9NPI5 230 aa33.9■■■■□ 3.02
SMDT1-203ENST00000484235 PTPRCP08575 1304 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 TOMM70O94826 608 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 IFFO2Q5TF58 517 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 C9orf131Q5VYM1 1079 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 BCL2L13Q9BXK5 485 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 SMC4Q9NTJ3 1288 aa33.89■■■■□ 3.02
SMDT1-203ENST00000484235 GCKRQ14397 625 aa33.88■■■■□ 3.01
SMDT1-203ENST00000484235 SF3B3Q15393 1217 aaKnown RBP33.88■■■■□ 3.01
SMDT1-203ENST00000484235 BEND3Q5T5X7 828 aa33.87■■■■□ 3.01
SMDT1-203ENST00000484235 JARID2Q92833 1246 aaPredicted RBP33.87■■■■□ 3.01
SMDT1-203ENST00000484235 SLX4Q8IY92 1834 aa33.86■■■■□ 3.01
SMDT1-203ENST00000484235 DDX46Q7L014 1031 aaKnown RBP33.86■■■■□ 3.01
SMDT1-203ENST00000484235 CDHR2Q9BYE9 1310 aa33.85■■■■□ 3.01
SMDT1-203ENST00000484235 H7C1W4 665 aa33.85■■■■□ 3.01
SMDT1-203ENST00000484235 RARSP54136 660 aaKnown RBP33.85■■■■□ 3.01
SMDT1-203ENST00000484235 BRPF1P55201 1214 aaPredicted RBP33.85■■■■□ 3.01
SMDT1-203ENST00000484235 PDE8AO60658 829 aa33.84■■■■□ 3.01
SMDT1-203ENST00000484235 BBOX1O75936 387 aa33.83■■■■□ 3.01
SMDT1-203ENST00000484235 SLC4A10Q6U841 1118 aa33.83■■■■□ 3.01
SMDT1-203ENST00000484235 NFKBIEO00221 500 aa33.82■■■■□ 3
SMDT1-203ENST00000484235 CCDC93Q567U6 631 aa33.82■■■■□ 3
SMDT1-203ENST00000484235 CC2D2BQ6DHV5 1058 aa33.82■■■■□ 3
SMDT1-203ENST00000484235 ABCC4O15439 1325 aa33.81■■■■□ 3
SMDT1-203ENST00000484235 UBE3BQ7Z3V4 1068 aa33.81■■■■□ 3
SMDT1-203ENST00000484235 RTKN2Q8IZC4 609 aa33.81■■■■□ 3
SMDT1-203ENST00000484235 PPEF1O14829 653 aaPredicted RBP33.8■■■■□ 3
SMDT1-203ENST00000484235 APLP1P51693 650 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms