RNA–Protein interactions for RNA: ENST00000484074.5

FNDC3A-203, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best)

Gene FNDC3A, Length 6,082 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-203ENST00000484074 ZNF213O14771 459 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 CCDC172P0C7W6 258 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 FAM193AP78312 1265 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 MVPQ14764 893 aaKnown RBP4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 PDRG1Q9NUG6 133 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 IRAK4Q9NWZ3 460 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 GAPVD1Q14C86 1478 aa4.61□□□□□ -1.67
FNDC3A-203ENST00000484074 CALM1P0DP23 149 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CALM2P0DP24 149 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CALM3P0DP25 149 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CEBPAP49715 358 aaPredicted RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 NOP9Q86U38 636 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CCDC148Q8NFR7 591 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 ZBTB21Q9ULJ3 1066 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 IFIT3O14879 490 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 PDE4AP27815 886 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 UTP14CQ5TAP6 766 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 GTPBP4Q9BZE4 634 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CWC25Q9NXE8 425 aaPredicted RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 NIP7Q9Y221 180 aaKnown RBP eCLIP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 NAIPQ13075 1403 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 FSD2A1L4K1 749 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 FAM13AO94988 1023 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 NEK4P51957 841 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CHRNA2Q15822 529 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CCT6BQ92526 530 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 TIGD1Q96MW7 591 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 MYOM3Q5VTT5 1437 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 NPHP3Q7Z494 1330 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 SPDYE3A6NKU9 549 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 GOLGA8AA7E2F4 631 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 GOLGA8BA8MQT2 603 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 GNPATO15228 680 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 ZEB2O60315 1214 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 PLCG2P16885 1265 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 LDHAL6AQ6ZMR3 332 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 ZCRB1Q8TBF4 217 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 KIAA1524Q8TCG1 905 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CFAP57Q96MR6 1250 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 AKNAQ7Z591 1439 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CRCPO75575 148 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CWC27Q6UX04 472 aaKnown RBP4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 TTC30AQ86WT1 665 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 DDX11Q96FC9 970 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 TNMDQ9H2S6 317 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 C1orf115Q9H7X2 142 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 HYPKQ9NX55 129 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 GINS2Q9Y248 185 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 CD2APQ9Y5K6 639 aa4.6□□□□□ -1.67
FNDC3A-203ENST00000484074 SMTNL1A8MU46 457 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 PABPC4Q13310 644 aaKnown RBP eCLIP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 TDRD12Q587J7 1177 aaKnown RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 LEKR1Q6ZMV7 388 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 NSMCE1Q8WV22 266 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 DDX12PQ92771 950 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 CCNL1Q9UK58 526 aaPredicted RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 USP21Q9UK80 565 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 CFAP45Q9UL16 551 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 LRFN2Q9ULH4 789 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 NSFL1CQ9UNZ2 370 aaKnown RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 RPGRIP1LQ68CZ1 1315 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 IDEP14735 1019 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 IFFO1Q0D2I5 559 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 LARP1BQ659C4 914 aaKnown RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 ZNF772Q68DY9 489 aaPredicted RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 FAM177A1Q8N128 213 aaPredicted RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 STX8Q9UNK0 236 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 MRVI1Q9Y6F6 885 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 FIBPO43427 364 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 MYCP01106 439 aaPredicted RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 UQCRFS1P1P0C7P4 283 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 TMED8Q6PL24 325 aaPredicted RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 LUZP1Q86V48 1076 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 ZBED2Q9BTP6 218 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 ANKRD2Q9GZV1 360 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.59□□□□□ -1.672e-6■■□□□ 13.1
FNDC3A-203ENST00000484074 MYO15BQ96JP2 1530 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 CSPG5O95196 566 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 RXRBP28702 533 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 MFSD6Q6ZSS7 791 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 CNBD1Q8NA66 436 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 JAKMIP1Q96N16 626 aaKnown RBP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 TMEM106CQ9BVX2 250 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 AZI2Q9H6S1 392 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 PFDN4Q9NQP4 134 aa4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.59□□□□□ -1.67
FNDC3A-203ENST00000484074 VPS8Q8N3P4 1428 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 PLEKHH2Q8IVE3 1493 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 ZBED4O75132 1171 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 SULF1Q8IWU6 871 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 GCC1Q96CN9 775 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 ZSCAN31Q96LW9 406 aaPredicted RBP4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 PPP1R9BQ96SB3 815 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 ARHGEF10LQ9HCE6 1279 aa4.59□□□□□ -1.68
FNDC3A-203ENST00000484074 PSMC4P43686 418 aa4.58□□□□□ -1.68
FNDC3A-203ENST00000484074 DNM2P50570 870 aa4.58□□□□□ -1.68
FNDC3A-203ENST00000484074 FAM114A1Q8IWE2 563 aa4.58□□□□□ -1.68
FNDC3A-203ENST00000484074 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.58□□□□□ -1.68
FNDC3A-203ENST00000484074 NOB1Q9ULX3 412 aaKnown RBP4.58□□□□□ -1.68
FNDC3A-203ENST00000484074 ATAD2Q6PL18 1390 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms