RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, human

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOA1-208	ENST00000483904	EIF4B	P23588	611 aa	Known RBP	7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	IGBP1	P78318	339 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	MTFR1	Q15390	333 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	ZNF394	Q53GI3	561 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	LCE2C	Q5TA81	110 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	ZCRB1	Q8TBF4	217 aa	Known RBP	7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	MICAL1	Q8TDZ2	1067 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	CHMP3	Q9Y3E7	222 aa		7.54	□□□□□ -1.2
NCOA1-208	ENST00000483904	hCG_2014768	A0A024R1R8	64 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	LOC100996750	A0A140TA64	210 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	RAB11FIP3	O75154	756 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	ALDH1A1	P00352	501 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	PCSK2	P16519	638 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	ESCO1	Q5FWF5	840 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	SLC9A9	Q8IVB4	645 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	GPATCH3	Q96I76	525 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	7.53	□□□□□ -1.2	4e-8	■■■■■ 29.7
NCOA1-208	ENST00000483904	KRTAP4-6	Q9BYQ5	205 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	ETNK1	Q9HBU6	452 aa		7.53	□□□□□ -1.2
NCOA1-208	ENST00000483904	USP31	Q70CQ4	1352 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904		A6NJY4	79 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	ZBTB39	O15060	712 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	PDGFA	P04085	211 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	SNRPB	P14678	240 aa	Known RBP	7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	ATF4	P18848	351 aa	Predicted RBP	7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	HIRA	P54198	1017 aa	Predicted RBP	7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	NNT	Q13423	1086 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	TCEAL1	Q15170	157 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	RNF187	Q5TA31	235 aa	Predicted RBP	7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	JAZF1	Q86VZ6	243 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	MKL1	Q969V6	931 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	MRFAP1L1	Q96HT8	127 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	SENP2	Q9HC62	589 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	ATP13A2	Q9NQ11	1180 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	SERTAD1	Q9UHV2	236 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	LRFN2	Q9ULH4	789 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	PCDHGB7	Q9Y5F8	929 aa		7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	ARID4B	Q4LE39	1312 aa	Predicted RBP	7.52	□□□□□ -1.21
NCOA1-208	ENST00000483904	FAM181B	A6NEQ2	426 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904		J3QL48	77 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	EIF1AY	O14602	144 aa	Known RBP	7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	GNRH1	P01148	92 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	RPLP1	P05386	114 aa	Known RBP	7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	XRCC5	P13010	732 aa	Known RBP	7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	CYP2U1	Q7Z449	544 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	CKAP2L	Q8IYA6	745 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	KDF1	Q8NAX2	398 aa	Predicted RBP	7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	TRIM47	Q96LD4	638 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	KLF16	Q9BXK1	252 aa	Predicted RBP	7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	GGT7	Q9UJ14	662 aa		7.51	□□□□□ -1.21
NCOA1-208	ENST00000483904	ST13	P50502	369 aa	Known RBP	7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	SMTN	P53814	917 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	BMS1	Q14692	1282 aa	Known RBP	7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	ATCAY	Q86WG3	371 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	SNIP1	Q8TAD8	396 aa	Known RBP	7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	EDEM1	Q92611	657 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	GPRASP2	Q96D09	838 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	TMX1	Q9H3N1	280 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	RAB6B	Q9NRW1	208 aa		7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	NOP58	Q9Y2X3	529 aa	Known RBP	7.5	□□□□□ -1.21
NCOA1-208	ENST00000483904	ENPP3	O14638	875 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	SMPD1	P17405	629 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	ZAP70	P43403	619 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	ANAPC15	P60006	121 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	DNM1	Q05193	864 aa	Known RBP	7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	CBLB	Q13191	982 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	C11orf91	Q3C1V1	193 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	CCDC181	Q5TID7	509 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	NBPF15	Q8N660	670 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	RASGRP4	Q8TDF6	673 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	ITPKC	Q96DU7	683 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	C12orf49	Q9H741	205 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	PGPEP1	Q9NXJ5	209 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	WASF2	Q9Y6W5	498 aa		7.49	□□□□□ -1.21
NCOA1-208	ENST00000483904	CDK2AP1	O14519	115 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	IL2RA	P01589	272 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	PAK2	Q13177	524 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	SERINC3	Q13530	473 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	TAF1C	Q15572	869 aa	Predicted RBP	7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	RTN1	Q16799	776 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	FAM26D	Q5JW98	314 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	KIFC2	Q96AC6	838 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	SEC16B	Q96JE7	1060 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	ARHGEF10L	Q9HCE6	1279 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	FAM13B	Q9NYF5	915 aa		7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904	DMGDH	Q9UI17	866 aa	Known RBP	7.48	□□□□□ -1.21
NCOA1-208	ENST00000483904		K7ELQ4	463 aa	Predicted RBP	7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	CPNE3	O75131	537 aa	Known RBP	7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	ADH1A	P07327	375 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	ORC1	Q13415	861 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904		Q6ZVU0	165 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	ERMP1	Q7Z2K6	904 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	ETFBKMT	Q8IXQ9	262 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	XAGE2	Q96GT9	111 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	SRCIN1	Q9C0H9	1055 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	ZFAND3	Q9H8U3	227 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	HRH3	Q9Y5N1	445 aa		7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	MRPL42	Q9Y6G3	142 aa	Known RBP	7.47	□□□□□ -1.21
NCOA1-208	ENST00000483904	SERTM1	A2A2V5	107 aa		7.46	□□□□□ -1.22
NCOA1-208	ENST00000483904	EML1	O00423	815 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms