RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 GRIN3BO60391 1043 aa34■■■■□ 3.03
GTF3C4-202ENST00000483873 TRMT2AQ8IZ69 625 aaKnown RBP34■■■■□ 3.03
GTF3C4-202ENST00000483873 ISCA1Q9BUE6 129 aa34■■■■□ 3.03
GTF3C4-202ENST00000483873 ADCY9O60503 1353 aa33.98■■■■□ 3.03
GTF3C4-202ENST00000483873 DDX58O95786 925 aaKnown RBP33.98■■■■□ 3.03
GTF3C4-202ENST00000483873 DALRD3Q5D0E6 543 aaKnown RBP33.98■■■■□ 3.03
GTF3C4-202ENST00000483873 UTP14AQ9BVJ6 771 aaKnown RBP33.98■■■■□ 3.03
GTF3C4-202ENST00000483873 ZNF622Q969S3 477 aaKnown RBP eCLIP33.97■■■■□ 3.03
GTF3C4-202ENST00000483873 LAMB2P55268 1798 aa33.97■■■■□ 3.03
GTF3C4-202ENST00000483873 FLIIQ13045 1269 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 MYD88Q99836 296 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 PDZRN3Q9UPQ7 1066 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 MAP3K2Q9Y2U5 619 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 RIC1Q4ADV7 1423 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 PI4KAP2A4QPH2 592 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 SRGNP10124 158 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 PI4KAP1Q8N8J0 262 aa33.96■■■■□ 3.03
GTF3C4-202ENST00000483873 SLX4Q8IY92 1834 aa33.95■■■■□ 3.03
GTF3C4-202ENST00000483873 KLRG2A4D1S0 409 aaPredicted RBP33.95■■■■□ 3.02
GTF3C4-202ENST00000483873 KSR2Q6VAB6 950 aa33.95■■■■□ 3.02
GTF3C4-202ENST00000483873 SYNE4Q8N205 404 aa33.95■■■■□ 3.02
GTF3C4-202ENST00000483873 DDX60Q8IY21 1712 aaKnown RBP33.95■■■■□ 3.02
GTF3C4-202ENST00000483873 TTLL6Q8N841 843 aa33.94■■■■□ 3.02
GTF3C4-202ENST00000483873 METTL22Q9BUU2 404 aaPredicted RBP33.94■■■■□ 3.02
GTF3C4-202ENST00000483873 TRMT112Q9UI30 125 aaKnown RBP33.94■■■■□ 3.02
GTF3C4-202ENST00000483873 TRIM28Q13263 835 aaKnown RBP33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 FKBP5Q13451 457 aaPredicted RBP33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 STYK1Q6J9G0 422 aa33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 C3orf67Q6ZVT6 689 aa33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 MASTLQ96GX5 879 aa33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 RNF123Q5XPI4 1314 aa33.91■■■■□ 3.02
GTF3C4-202ENST00000483873 SH3TC1Q8TE82 1336 aa33.89■■■■□ 3.02
GTF3C4-202ENST00000483873 NPR1P16066 1061 aa33.88■■■■□ 3.01
GTF3C4-202ENST00000483873 HCLS1P14317 486 aaPredicted RBP33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 CRY2Q49AN0 593 aa33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 SLC10A5Q5PT55 438 aa33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 FAM89AQ96GI7 184 aa33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 RTL5Q5HYW3 569 aaPredicted RBP33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 ARHGAP27Q6ZUM4 889 aa33.87■■■■□ 3.01
GTF3C4-202ENST00000483873 IGKV5-2P06315 115 aa33.86■■■■□ 3.01
GTF3C4-202ENST00000483873 CNKSR1Q969H4 720 aa33.86■■■■□ 3.01
GTF3C4-202ENST00000483873 PRPF40BQ6NWY9 871 aaKnown RBP33.85■■■■□ 3.01
GTF3C4-202ENST00000483873 CCDC191Q8NCU4 936 aa33.85■■■■□ 3.01
GTF3C4-202ENST00000483873 ZNF219Q9P2Y4 722 aaPredicted RBP33.85■■■■□ 3.01
GTF3C4-202ENST00000483873 MRPL50Q8N5N7 158 aaKnown RBP33.84■■■■□ 3.01
GTF3C4-202ENST00000483873 SSH1Q8WYL5 1049 aa33.84■■■■□ 3.01
GTF3C4-202ENST00000483873 F6X3S4 739 aa33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 CWF19L2Q2TBE0 894 aaKnown RBP33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 DNAAF4Q8WXU2 420 aa33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 NLRP3Q96P20 1036 aa33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 BCL2L13Q9BXK5 485 aa33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 CWC25Q9NXE8 425 aaPredicted RBP33.83■■■■□ 3.01
GTF3C4-202ENST00000483873 NEXNQ0ZGT2 675 aa33.82■■■■□ 3
GTF3C4-202ENST00000483873 SBF1O95248 1867 aa33.82■■■■□ 3
GTF3C4-202ENST00000483873 C21orf2O43822 256 aa33.81■■■■□ 3
GTF3C4-202ENST00000483873 JARID2Q92833 1246 aaPredicted RBP33.81■■■■□ 3
GTF3C4-202ENST00000483873 RPGRQ92834 1020 aaKnown RBP33.81■■■■□ 3
GTF3C4-202ENST00000483873 ZBED9Q6R2W3 1325 aa33.81■■■■□ 3
GTF3C4-202ENST00000483873 TAF1P21675 1872 aa33.81■■■■□ 3
GTF3C4-202ENST00000483873 FER1L6Q2WGJ9 1857 aa33.81■■■■□ 3
GTF3C4-202ENST00000483873 ZBTB38Q8NAP3 1195 aaPredicted RBP33.8■■■■□ 3
GTF3C4-202ENST00000483873 NEURL1BA8MQ27 555 aa33.79■■■■□ 3
GTF3C4-202ENST00000483873 CCDC88AQ3V6T2 1871 aa33.79■■■■□ 3
GTF3C4-202ENST00000483873 HOXA10P31260 410 aaPredicted RBP33.78■■■■□ 3
GTF3C4-202ENST00000483873 IRS4O14654 1257 aaPredicted RBP33.77■■■■□ 3
GTF3C4-202ENST00000483873 PCCAP05165 728 aaPredicted RBP33.77■■■■□ 3
GTF3C4-202ENST00000483873 CT47B1P0C2W7 299 aaPredicted RBP33.77■■■■□ 3
GTF3C4-202ENST00000483873 ALDH1B1P30837 517 aa33.77■■■■□ 3
GTF3C4-202ENST00000483873 RASSF7Q02833 373 aa33.77■■■■□ 3
GTF3C4-202ENST00000483873 ZNF784Q8NCA9 323 aaPredicted RBP33.77■■■■□ 3
GTF3C4-202ENST00000483873 ALDH1L2Q3SY69 923 aa33.76■■■□□ 2.99
GTF3C4-202ENST00000483873 C7orf43Q8WVR3 580 aa33.75■■■□□ 2.99
GTF3C4-202ENST00000483873 RBM17Q96I25 401 aaKnown RBP33.75■■■□□ 2.99
GTF3C4-202ENST00000483873 SMC4Q9NTJ3 1288 aa33.75■■■□□ 2.99
GTF3C4-202ENST00000483873 MYH3P11055 1940 aa33.74■■■□□ 2.99
GTF3C4-202ENST00000483873 OLFM4Q6UX06 510 aa33.74■■■□□ 2.99
GTF3C4-202ENST00000483873 LINS1Q8NG48 757 aa33.73■■■□□ 2.99
GTF3C4-202ENST00000483873 CRAMP1Q96RY5 1269 aa33.73■■■□□ 2.99
GTF3C4-202ENST00000483873 ABCC4O15439 1325 aa33.72■■■□□ 2.99
GTF3C4-202ENST00000483873 NFKBIEO00221 500 aa33.72■■■□□ 2.99
GTF3C4-202ENST00000483873 SLC51AQ86UW1 340 aa33.72■■■□□ 2.99
GTF3C4-202ENST00000483873 COL4A1P02462 1669 aa33.72■■■□□ 2.99
GTF3C4-202ENST00000483873 GCKRQ14397 625 aa33.71■■■□□ 2.99
GTF3C4-202ENST00000483873 BEND3Q5T5X7 828 aa33.71■■■□□ 2.99
GTF3C4-202ENST00000483873 PRELPP51888 382 aa33.7■■■□□ 2.98
GTF3C4-202ENST00000483873 SLC4A10Q6U841 1118 aa33.7■■■□□ 2.98
GTF3C4-202ENST00000483873 PTPRCP08575 1304 aa33.69■■■□□ 2.98
GTF3C4-202ENST00000483873 CDHR2Q9BYE9 1310 aa33.69■■■□□ 2.98
GTF3C4-202ENST00000483873 RARSP54136 660 aaKnown RBP33.69■■■□□ 2.98
GTF3C4-202ENST00000483873 SF3B3Q15393 1217 aaKnown RBP33.69■■■□□ 2.98
GTF3C4-202ENST00000483873 UBE3BQ7Z3V4 1068 aa33.68■■■□□ 2.98
GTF3C4-202ENST00000483873 H7C1W4 665 aa33.67■■■□□ 2.98
GTF3C4-202ENST00000483873 PPEF1O14829 653 aaPredicted RBP33.67■■■□□ 2.98
GTF3C4-202ENST00000483873 CCDC93Q567U6 631 aa33.67■■■□□ 2.98
GTF3C4-202ENST00000483873 C9orf131Q5VYM1 1079 aa33.67■■■□□ 2.98
GTF3C4-202ENST00000483873 DDX46Q7L014 1031 aaKnown RBP33.67■■■□□ 2.98
GTF3C4-202ENST00000483873 PDE8AO60658 829 aa33.66■■■□□ 2.98
GTF3C4-202ENST00000483873 SOGA3Q5TF21 947 aa33.66■■■□□ 2.98
GTF3C4-202ENST00000483873 SNED1Q8TER0 1413 aa33.66■■■□□ 2.98
GTF3C4-202ENST00000483873 DICER1Q9UPY3 1922 aaKnown RBP33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms