RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 EN1Q05925 392 aaPredicted RBP21.37■■□□□ 1.01
MRPL28-210ENST00000483764 NLRP10Q86W26 655 aa21.37■■□□□ 1.01
MRPL28-210ENST00000483764 ZPR1O75312 459 aa21.36■■□□□ 1.01
MRPL28-210ENST00000483764 PHF14O94880 888 aa21.36■■□□□ 1.01
MRPL28-210ENST00000483764 RFC4P35249 363 aa21.36■■□□□ 1.01
MRPL28-210ENST00000483764 ATP8B2P98198 1209 aa21.36■■□□□ 1.01
MRPL28-210ENST00000483764 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
MRPL28-210ENST00000483764 JARID2Q92833 1246 aaPredicted RBP21.36■■□□□ 1.01
MRPL28-210ENST00000483764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
MRPL28-210ENST00000483764 SSFA2P28290 1259 aa21.35■■□□□ 1.01
MRPL28-210ENST00000483764 BAG6P46379 1132 aa21.35■■□□□ 1.01
MRPL28-210ENST00000483764 CASP7P55210 303 aa21.35■■□□□ 1.01
MRPL28-210ENST00000483764 EZH2Q15910 746 aaKnown RBP21.35■■□□□ 1.01
MRPL28-210ENST00000483764 SUCLG2Q96I99 432 aa21.35■■□□□ 1.01
MRPL28-210ENST00000483764 HMMRO75330 724 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 KAZALD1Q96I82 304 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
MRPL28-210ENST00000483764 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
MRPL28-210ENST00000483764 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 CCDC125Q86Z20 511 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 AKT1S1Q96B36 256 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 BCL2L12Q9HB09 334 aa21.34■■□□□ 1.01
MRPL28-210ENST00000483764 AFDNP55196 1824 aaKnown RBP21.33■■□□□ 1.01
MRPL28-210ENST00000483764 PCCAP05165 728 aaPredicted RBP21.33■■□□□ 1
MRPL28-210ENST00000483764 ZNF827Q17R98 1081 aa21.33■■□□□ 1
MRPL28-210ENST00000483764 PARP10Q53GL7 1025 aa21.33■■□□□ 1
MRPL28-210ENST00000483764 ZBTB38Q8NAP3 1195 aaPredicted RBP21.33■■□□□ 1
MRPL28-210ENST00000483764 TFCP2L1Q9NZI6 479 aa21.33■■□□□ 1
MRPL28-210ENST00000483764 NIP7Q9Y221 180 aaKnown RBP eCLIP21.33■■□□□ 1
MRPL28-210ENST00000483764 UBN2Q6ZU65 1347 aa21.33■■□□□ 1
MRPL28-210ENST00000483764 NUP98P52948 1817 aa21.33■■□□□ 1
MRPL28-210ENST00000483764 RTL5Q5HYW3 569 aaPredicted RBP21.32■■□□□ 1
MRPL28-210ENST00000483764 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
MRPL28-210ENST00000483764 BICC1Q9H694 974 aaKnown RBP21.32■■□□□ 1
MRPL28-210ENST00000483764 USP42Q9H9J4 1324 aaKnown RBP21.32■■□□□ 1
MRPL28-210ENST00000483764 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
MRPL28-210ENST00000483764 MTX1Q13505 466 aa21.31■■□□□ 1
MRPL28-210ENST00000483764 SMC5Q8IY18 1101 aa21.31■■□□□ 1
MRPL28-210ENST00000483764 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
MRPL28-210ENST00000483764 SUSD4Q5VX71 490 aa21.3■■□□□ 1
MRPL28-210ENST00000483764 DEFB132Q7Z7B7 95 aa21.3■■□□□ 1
MRPL28-210ENST00000483764 SSH3Q8TE77 659 aa21.3■■□□□ 1
MRPL28-210ENST00000483764 GCC1Q96CN9 775 aa21.3■■□□□ 1
MRPL28-210ENST00000483764 FAM89AQ96GI7 184 aa21.3■■□□□ 1
MRPL28-210ENST00000483764 SRGAP3O43295 1099 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 EPHA10Q5JZY3 1008 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 DCTPP1Q9H773 170 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 ANKRD36CQ5JPF3 1778 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 BCORQ6W2J9 1755 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 POLA2Q14181 598 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 C8orf34Q49A92 452 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 TBC1D9BQ66K14 1250 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 UTP14AQ9BVJ6 771 aaKnown RBP21.29■■□□□ 1
MRPL28-210ENST00000483764 UBR3Q6ZT12 1888 aa21.29■■□□□ 1
MRPL28-210ENST00000483764 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
MRPL28-210ENST00000483764 FLAD1Q8NFF5 587 aa21.28■■□□□ 1
MRPL28-210ENST00000483764 SCN7AQ01118 1682 aa21.28■■□□□ 1
MRPL28-210ENST00000483764 FOXO4P98177 505 aa21.27■■□□□ 1
MRPL28-210ENST00000483764 RABL6Q3YEC7 729 aaPredicted RBP21.27■■□□□ 1
MRPL28-210ENST00000483764 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
MRPL28-210ENST00000483764 SETDB2Q96T68 719 aa21.27■■□□□ 1
MRPL28-210ENST00000483764 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
MRPL28-210ENST00000483764 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
MRPL28-210ENST00000483764 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
MRPL28-210ENST00000483764 SH3TC1Q8TE82 1336 aa21.26■□□□□ 0.99
MRPL28-210ENST00000483764 NTSR2O95665 410 aa21.25■□□□□ 0.99
MRPL28-210ENST00000483764 STK32BQ9NY57 414 aa21.25■□□□□ 0.99
MRPL28-210ENST00000483764 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
MRPL28-210ENST00000483764 IRS4O14654 1257 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-210ENST00000483764 GYS1P13807 737 aa21.24■□□□□ 0.99
MRPL28-210ENST00000483764 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
MRPL28-210ENST00000483764 LMBR1LQ6UX01 489 aa21.24■□□□□ 0.99
MRPL28-210ENST00000483764 COL23A1Q86Y22 540 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-210ENST00000483764 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
MRPL28-210ENST00000483764 RGS3P49796 1198 aa21.24■□□□□ 0.99
MRPL28-210ENST00000483764 ANO8Q9HCE9 1232 aaPredicted RBP21.24■□□□□ 0.99
MRPL28-210ENST00000483764 NUCB1Q02818 461 aa21.23■□□□□ 0.99
MRPL28-210ENST00000483764 SURF6O75683 361 aaKnown RBP21.22■□□□□ 0.99
MRPL28-210ENST00000483764 HSP90B1P14625 803 aaKnown RBP21.22■□□□□ 0.99
MRPL28-210ENST00000483764 NFIXQ14938 502 aa21.22■□□□□ 0.99
MRPL28-210ENST00000483764 ANKRD45Q5TZF3 282 aa21.22■□□□□ 0.99
MRPL28-210ENST00000483764 NYXQ9GZU5 481 aa21.22■□□□□ 0.99
MRPL28-210ENST00000483764 EXOC6BQ9Y2D4 811 aa21.22■□□□□ 0.99
MRPL28-210ENST00000483764 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
MRPL28-210ENST00000483764 PDE8AO60658 829 aa21.21■□□□□ 0.99
MRPL28-210ENST00000483764 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
MRPL28-210ENST00000483764 DAXXQ9UER7 740 aaPredicted RBP21.21■□□□□ 0.99
MRPL28-210ENST00000483764 CSF1RP07333 972 aa21.2■□□□□ 0.98
MRPL28-210ENST00000483764 GTF2E1P29083 439 aaPredicted RBP21.2■□□□□ 0.98
MRPL28-210ENST00000483764 TPTE2Q6XPS3 522 aa21.2■□□□□ 0.98
MRPL28-210ENST00000483764 CHD1LQ86WJ1 897 aa21.2■□□□□ 0.98
MRPL28-210ENST00000483764 SKAP1Q86WV1 359 aa21.2■□□□□ 0.98
MRPL28-210ENST00000483764 NBPF5PQ86XG9 351 aaPredicted RBP21.2■□□□□ 0.98
MRPL28-210ENST00000483764 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
MRPL28-210ENST00000483764 HCLS1P14317 486 aaPredicted RBP21.19■□□□□ 0.98
MRPL28-210ENST00000483764 CARMIL3Q8ND23 1372 aa21.19■□□□□ 0.98
MRPL28-210ENST00000483764 APBB1O00213 710 aa21.19■□□□□ 0.98
MRPL28-210ENST00000483764 TM4SF1P30408 202 aa21.19■□□□□ 0.98
MRPL28-210ENST00000483764 RFX5P48382 616 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms