RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
COMMD2-205ENST00000483708 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
COMMD2-205ENST00000483708 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
COMMD2-205ENST00000483708 DDX58O95786 925 aaKnown RBP16.16■□□□□ 0.18
COMMD2-205ENST00000483708 EXOSC9Q06265 439 aaKnown RBP16.16■□□□□ 0.18
COMMD2-205ENST00000483708 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
COMMD2-205ENST00000483708 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
COMMD2-205ENST00000483708 ZNF428Q96B54 188 aa16.16■□□□□ 0.18
COMMD2-205ENST00000483708 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
COMMD2-205ENST00000483708 ISCA1Q9BUE6 129 aa16.16■□□□□ 0.18
COMMD2-205ENST00000483708 ABCC12Q96J65 1359 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
COMMD2-205ENST00000483708 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 RASSF7Q02833 373 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 CRY2Q49AN0 593 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 RNF181Q9P0P0 153 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 BCORQ6W2J9 1755 aa16.15■□□□□ 0.18
COMMD2-205ENST00000483708 VAMP4O75379 141 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
COMMD2-205ENST00000483708 LMNB1P20700 586 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
COMMD2-205ENST00000483708 SOGA3Q5TF21 947 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 SYNE4Q8N205 404 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
COMMD2-205ENST00000483708 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
COMMD2-205ENST00000483708 RNF123Q5XPI4 1314 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 SH3TC1Q8TE82 1336 aa16.14■□□□□ 0.17
COMMD2-205ENST00000483708 NFKBIEO00221 500 aa16.13■□□□□ 0.17
COMMD2-205ENST00000483708 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
COMMD2-205ENST00000483708 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
COMMD2-205ENST00000483708 C7orf43Q8WVR3 580 aa16.13■□□□□ 0.17
COMMD2-205ENST00000483708 MYD88Q99836 296 aa16.13■□□□□ 0.17
COMMD2-205ENST00000483708 ADCY9O60503 1353 aa16.13■□□□□ 0.17
COMMD2-205ENST00000483708 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
COMMD2-205ENST00000483708 MIER1Q8N108 512 aa16.12■□□□□ 0.17
COMMD2-205ENST00000483708 FAM89AQ96GI7 184 aa16.12■□□□□ 0.17
COMMD2-205ENST00000483708 MAP3K2Q9Y2U5 619 aa16.12■□□□□ 0.17
COMMD2-205ENST00000483708 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
COMMD2-205ENST00000483708 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 KCNA4P22459 653 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 G2E3Q7L622 706 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 CRAMP1Q96RY5 1269 aa16.11■□□□□ 0.17
COMMD2-205ENST00000483708 METTL22Q9BUU2 404 aaPredicted RBP16.11■□□□□ 0.17
COMMD2-205ENST00000483708 PRELPP51888 382 aa16.1■□□□□ 0.17
COMMD2-205ENST00000483708 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
COMMD2-205ENST00000483708 OLFM4Q6UX06 510 aa16.1■□□□□ 0.17
COMMD2-205ENST00000483708 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
COMMD2-205ENST00000483708 TAOK3Q9H2K8 898 aa16.1■□□□□ 0.17
COMMD2-205ENST00000483708 RIC1Q4ADV7 1423 aa16.1■□□□□ 0.17
COMMD2-205ENST00000483708 E9PSI1 815 aa16.09■□□□□ 0.17
COMMD2-205ENST00000483708 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
COMMD2-205ENST00000483708 CWC25Q9NXE8 425 aaPredicted RBP16.09■□□□□ 0.17
COMMD2-205ENST00000483708 CHD4Q14839 1912 aa16.08■□□□□ 0.16
COMMD2-205ENST00000483708 IRS4O14654 1257 aaPredicted RBP16.08■□□□□ 0.16
COMMD2-205ENST00000483708 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.16
COMMD2-205ENST00000483708 FLIIQ13045 1269 aa16.08■□□□□ 0.16
COMMD2-205ENST00000483708 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
COMMD2-205ENST00000483708 ZBTB38Q8NAP3 1195 aaPredicted RBP16.08■□□□□ 0.16
COMMD2-205ENST00000483708 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
COMMD2-205ENST00000483708 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
COMMD2-205ENST00000483708 BBOX1O75936 387 aa16.07■□□□□ 0.16
COMMD2-205ENST00000483708 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
COMMD2-205ENST00000483708 FKBP4Q02790 459 aaKnown RBP eCLIP16.07■□□□□ 0.16
COMMD2-205ENST00000483708 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
COMMD2-205ENST00000483708 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
COMMD2-205ENST00000483708 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
COMMD2-205ENST00000483708 ANKRD31Q8N7Z5 1873 aa16.07■□□□□ 0.16
COMMD2-205ENST00000483708 NUP98P52948 1817 aa16.06■□□□□ 0.16
COMMD2-205ENST00000483708 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
COMMD2-205ENST00000483708 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
COMMD2-205ENST00000483708 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
COMMD2-205ENST00000483708 ABCC4O15439 1325 aa16.05■□□□□ 0.16
COMMD2-205ENST00000483708 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
COMMD2-205ENST00000483708 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
COMMD2-205ENST00000483708 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
COMMD2-205ENST00000483708 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
COMMD2-205ENST00000483708 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
COMMD2-205ENST00000483708 GRIPAP1Q4V328 841 aa16.05■□□□□ 0.16
COMMD2-205ENST00000483708 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
COMMD2-205ENST00000483708 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
COMMD2-205ENST00000483708 GRAPQ13588 217 aa16.04■□□□□ 0.16
COMMD2-205ENST00000483708 GRAPLQ8TC17 118 aaPredicted RBP16.04■□□□□ 0.16
COMMD2-205ENST00000483708 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
COMMD2-205ENST00000483708 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
COMMD2-205ENST00000483708 ATP6V0A2Q9Y487 856 aa16.04■□□□□ 0.16
COMMD2-205ENST00000483708 GLTPD2A6NH11 291 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
COMMD2-205ENST00000483708 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 PSMD1Q99460 953 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 RRAGCQ9HB90 399 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 NMRK2Q9NPI5 230 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
COMMD2-205ENST00000483708 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
COMMD2-205ENST00000483708 KIF3CO14782 793 aa16.02■□□□□ 0.16
COMMD2-205ENST00000483708 PDE8AO60658 829 aa16.02■□□□□ 0.16
COMMD2-205ENST00000483708 SP8Q8IXZ3 490 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms