RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 RTKN2Q8IZC4 609 aa27.95■■■□□ 2.06
SYPL1-206ENST00000483448 IFT57Q9NWB7 429 aa27.95■■■□□ 2.06
SYPL1-206ENST00000483448 IBTKQ9P2D0 1353 aaPredicted RBP27.95■■■□□ 2.06
SYPL1-206ENST00000483448 ZNF853P0CG23 659 aa27.94■■■□□ 2.06
SYPL1-206ENST00000483448 VEGFAP15692 232 aaPredicted RBP27.94■■■□□ 2.06
SYPL1-206ENST00000483448 RBM17Q96I25 401 aaKnown RBP27.94■■■□□ 2.06
SYPL1-206ENST00000483448 NLRP3Q96P20 1036 aa27.94■■■□□ 2.06
SYPL1-206ENST00000483448 DBF4Q9UBU7 674 aaPredicted RBP27.94■■■□□ 2.06
SYPL1-206ENST00000483448 FER1L6Q2WGJ9 1857 aa27.93■■■□□ 2.06
SYPL1-206ENST00000483448 FKBP4Q02790 459 aaKnown RBP eCLIP27.93■■■□□ 2.06
SYPL1-206ENST00000483448 ELL2O00472 640 aaPredicted RBP27.92■■■□□ 2.06
SYPL1-206ENST00000483448 TCIRG1Q13488 830 aa27.92■■■□□ 2.06
SYPL1-206ENST00000483448 MRS2Q9HD23 443 aa27.91■■■□□ 2.06
SYPL1-206ENST00000483448 ZNF277Q9NRM2 450 aaPredicted RBP27.91■■■□□ 2.06
SYPL1-206ENST00000483448 HYPKQ9NX55 129 aa27.91■■■□□ 2.06
SYPL1-206ENST00000483448 ARFGEF2Q9Y6D5 1785 aa27.91■■■□□ 2.06
SYPL1-206ENST00000483448 TCERG1O14776 1098 aaKnown RBP27.9■■■□□ 2.06
SYPL1-206ENST00000483448 HOXA10P31260 410 aaPredicted RBP27.9■■■□□ 2.06
SYPL1-206ENST00000483448 ANKRD13DQ6ZTN6 518 aa27.9■■■□□ 2.06
SYPL1-206ENST00000483448 NLRP10Q86W26 655 aa27.9■■■□□ 2.06
SYPL1-206ENST00000483448 TRMT112Q9UI30 125 aaKnown RBP27.9■■■□□ 2.06
SYPL1-206ENST00000483448 TNRC6CQ9HCJ0 1690 aaKnown RBP27.89■■■□□ 2.06
SYPL1-206ENST00000483448 APLP1P51693 650 aa27.89■■■□□ 2.06
SYPL1-206ENST00000483448 FSTL1Q12841 308 aa27.89■■■□□ 2.06
SYPL1-206ENST00000483448 SYNE4Q8N205 404 aa27.89■■■□□ 2.06
SYPL1-206ENST00000483448 PLBD2Q8NHP8 589 aa27.89■■■□□ 2.06
SYPL1-206ENST00000483448 TIAM2Q8IVF5 1701 aa27.89■■■□□ 2.05
SYPL1-206ENST00000483448 SLC10A5Q5PT55 438 aa27.88■■■□□ 2.05
SYPL1-206ENST00000483448 C3orf67Q6ZVT6 689 aa27.88■■■□□ 2.05
SYPL1-206ENST00000483448 ZNF428Q96B54 188 aa27.88■■■□□ 2.05
SYPL1-206ENST00000483448 CRAMP1Q96RY5 1269 aa27.88■■■□□ 2.05
SYPL1-206ENST00000483448 RIC1Q4ADV7 1423 aa27.87■■■□□ 2.05
SYPL1-206ENST00000483448 HCLS1P14317 486 aaPredicted RBP27.87■■■□□ 2.05
SYPL1-206ENST00000483448 TMX4Q9H1E5 349 aaPredicted RBP27.87■■■□□ 2.05
SYPL1-206ENST00000483448 DDNO94850 711 aaPredicted RBP27.86■■■□□ 2.05
SYPL1-206ENST00000483448 CC2D2BQ6DHV5 1058 aa27.86■■■□□ 2.05
SYPL1-206ENST00000483448 SMC1BQ8NDV3 1235 aa27.86■■■□□ 2.05
SYPL1-206ENST00000483448 RNF123Q5XPI4 1314 aa27.86■■■□□ 2.05
SYPL1-206ENST00000483448 PPEF1O14829 653 aaPredicted RBP27.85■■■□□ 2.05
SYPL1-206ENST00000483448 IARSP41252 1262 aaKnown RBP27.84■■■□□ 2.05
SYPL1-206ENST00000483448 C8orf58Q8NAV2 365 aa27.84■■■□□ 2.05
SYPL1-206ENST00000483448 SH3TC1Q8TE82 1336 aa27.84■■■□□ 2.05
SYPL1-206ENST00000483448 DICER1Q9UPY3 1922 aaKnown RBP27.83■■■□□ 2.05
SYPL1-206ENST00000483448 POTECB2RU33 542 aa27.83■■■□□ 2.05
SYPL1-206ENST00000483448 ATP5J2-PTCD1G3V325 749 aa27.83■■■□□ 2.05
SYPL1-206ENST00000483448 RIC3Q7Z5B4 369 aa27.83■■■□□ 2.05
SYPL1-206ENST00000483448 GOLGA2Q08379 1002 aa27.82■■■□□ 2.04
SYPL1-206ENST00000483448 PSMD1Q99460 953 aa27.82■■■□□ 2.04
SYPL1-206ENST00000483448 CHMP4AQ9BY43 222 aa27.82■■■□□ 2.04
SYPL1-206ENST00000483448 GRIPAP1Q4V328 841 aa27.81■■■□□ 2.04
SYPL1-206ENST00000483448 PHAXQ9H814 394 aaKnown RBP27.81■■■□□ 2.04
SYPL1-206ENST00000483448 CCDC30Q5VVM6 783 aa27.8■■■□□ 2.04
SYPL1-206ENST00000483448 DDX46Q7L014 1031 aaKnown RBP27.8■■■□□ 2.04
SYPL1-206ENST00000483448 WWC1Q8IX03 1113 aa27.8■■■□□ 2.04
SYPL1-206ENST00000483448 JDP2Q8WYK2 163 aa27.8■■■□□ 2.04
SYPL1-206ENST00000483448 TSR2Q969E8 191 aaKnown RBP27.8■■■□□ 2.04
SYPL1-206ENST00000483448 CCDC27Q2M243 656 aa27.79■■■□□ 2.04
SYPL1-206ENST00000483448 ISCA1Q9BUE6 129 aa27.79■■■□□ 2.04
SYPL1-206ENST00000483448 SALL2Q9Y467 1007 aaPredicted RBP27.79■■■□□ 2.04
SYPL1-206ENST00000483448 ABCC4O15439 1325 aa27.78■■■□□ 2.04
SYPL1-206ENST00000483448 FAM89AQ96GI7 184 aa27.78■■■□□ 2.04
SYPL1-206ENST00000483448 CEP350Q5VT06 3117 aa27.78■■■□□ 2.04
SYPL1-206ENST00000483448 BBOX1O75936 387 aa27.77■■■□□ 2.04
SYPL1-206ENST00000483448 RTL5Q5HYW3 569 aaPredicted RBP27.77■■■□□ 2.04
SYPL1-206ENST00000483448 TSPYL6Q8N831 410 aa27.77■■■□□ 2.04
SYPL1-206ENST00000483448 ANKRD36CQ5JPF3 1778 aa27.77■■■□□ 2.04
SYPL1-206ENST00000483448 WDR90Q96KV7 1748 aa27.76■■■□□ 2.03
SYPL1-206ENST00000483448 ZNF541Q9H0D2 1346 aa27.76■■■□□ 2.03
SYPL1-206ENST00000483448 SLC51AQ86UW1 340 aa27.76■■■□□ 2.03
SYPL1-206ENST00000483448 LARGE2Q8N3Y3 721 aa27.76■■■□□ 2.03
SYPL1-206ENST00000483448 ATP6V0A2Q9Y487 856 aa27.76■■■□□ 2.03
SYPL1-206ENST00000483448 IQCA1LA6NCM1 817 aa27.75■■■□□ 2.03
SYPL1-206ENST00000483448 FZD9O00144 591 aa27.74■■■□□ 2.03
SYPL1-206ENST00000483448 DDX58O95786 925 aaKnown RBP27.74■■■□□ 2.03
SYPL1-206ENST00000483448 HTRA3P83110 453 aa27.74■■■□□ 2.03
SYPL1-206ENST00000483448 MYD88Q99836 296 aa27.74■■■□□ 2.03
SYPL1-206ENST00000483448 EIF6P56537 245 aaKnown RBP27.73■■■□□ 2.03
SYPL1-206ENST00000483448 TRIM28Q13263 835 aaKnown RBP27.73■■■□□ 2.03
SYPL1-206ENST00000483448 STK31Q9BXU1 1019 aa27.73■■■□□ 2.03
SYPL1-206ENST00000483448 GRAPQ13588 217 aa27.72■■■□□ 2.03
SYPL1-206ENST00000483448 SP8Q8IXZ3 490 aa27.72■■■□□ 2.03
SYPL1-206ENST00000483448 FAM9BQ8IZU0 186 aa27.72■■■□□ 2.03
SYPL1-206ENST00000483448 GRAPLQ8TC17 118 aaPredicted RBP27.72■■■□□ 2.03
SYPL1-206ENST00000483448 L3MBTL3Q96JM7 780 aaPredicted RBP27.72■■■□□ 2.03
SYPL1-206ENST00000483448 DPP8Q6V1X1 898 aaPredicted RBP27.71■■■□□ 2.03
SYPL1-206ENST00000483448 SNED1Q8TER0 1413 aa27.71■■■□□ 2.03
SYPL1-206ENST00000483448 GJA3Q9Y6H8 435 aa27.71■■■□□ 2.03
SYPL1-206ENST00000483448 IL16Q14005 1332 aa27.7■■■□□ 2.03
SYPL1-206ENST00000483448 IRS4O14654 1257 aaPredicted RBP27.7■■■□□ 2.02
SYPL1-206ENST00000483448 PPIP5K2O43314 1243 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 TWISTNBQ3B726 338 aaPredicted RBP27.7■■■□□ 2.02
SYPL1-206ENST00000483448 NCBP3Q53F19 620 aaKnown RBP27.7■■■□□ 2.02
SYPL1-206ENST00000483448 CHADLQ6NUI6 762 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 NIM1KQ8IY84 436 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 MPNDQ8N594 471 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 DNAJC5GQ8N7S2 189 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 SUPT20HQ8NEM7 779 aa27.7■■■□□ 2.02
SYPL1-206ENST00000483448 GPC2Q8N158 579 aa27.69■■■□□ 2.02
SYPL1-206ENST00000483448 TAF1DQ9H5J8 278 aaPredicted RBP27.69■■■□□ 2.02
SYPL1-206ENST00000483448 HACL1Q9UJ83 578 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms