RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 PCNTO95613 3336 aa15.74■□□□□ 0.11
HDLBP-239ENST00000483086 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
HDLBP-239ENST00000483086 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
HDLBP-239ENST00000483086 ANP32CO43423 234 aa15.73■□□□□ 0.11
HDLBP-239ENST00000483086 HOXB7P09629 217 aa15.73■□□□□ 0.11
HDLBP-239ENST00000483086 NLRP10Q86W26 655 aa15.73■□□□□ 0.11
HDLBP-239ENST00000483086 WWC1Q8IX03 1113 aa15.73■□□□□ 0.11
HDLBP-239ENST00000483086 NYXQ9GZU5 481 aa15.73■□□□□ 0.11
HDLBP-239ENST00000483086 PHAXQ9H814 394 aaKnown RBP15.73■□□□□ 0.11
HDLBP-239ENST00000483086 LTBP3Q9NS15 1303 aa15.72■□□□□ 0.11
HDLBP-239ENST00000483086 POTECB2RU33 542 aa15.72■□□□□ 0.11
HDLBP-239ENST00000483086 GNAI1P63096 354 aa15.72■□□□□ 0.11
HDLBP-239ENST00000483086 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
HDLBP-239ENST00000483086 GTF2E1P29083 439 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-239ENST00000483086 TCIRG1Q13488 830 aa15.71■□□□□ 0.11
HDLBP-239ENST00000483086 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
HDLBP-239ENST00000483086 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
HDLBP-239ENST00000483086 HOXA10P31260 410 aaPredicted RBP15.7■□□□□ 0.1
HDLBP-239ENST00000483086 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
HDLBP-239ENST00000483086 SLC10A5Q5PT55 438 aa15.7■□□□□ 0.1
HDLBP-239ENST00000483086 ISCA1Q9BUE6 129 aa15.7■□□□□ 0.1
HDLBP-239ENST00000483086 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
HDLBP-239ENST00000483086 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
HDLBP-239ENST00000483086 ZC3H4Q9UPT8 1303 aaKnown RBP15.69■□□□□ 0.1
HDLBP-239ENST00000483086 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
HDLBP-239ENST00000483086 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
HDLBP-239ENST00000483086 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-239ENST00000483086 PLBD2Q8NHP8 589 aa15.69■□□□□ 0.1
HDLBP-239ENST00000483086 SPINK5Q9NQ38 1064 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-239ENST00000483086 ZNF277Q9NRM2 450 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-239ENST00000483086 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-239ENST00000483086 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
HDLBP-239ENST00000483086 TCERG1O14776 1098 aaKnown RBP15.68■□□□□ 0.1
HDLBP-239ENST00000483086 CCDC93Q567U6 631 aa15.68■□□□□ 0.1
HDLBP-239ENST00000483086 ANKRD13DQ6ZTN6 518 aa15.68■□□□□ 0.1
HDLBP-239ENST00000483086 PPP1R42Q7Z4L9 355 aa15.68■□□□□ 0.1
HDLBP-239ENST00000483086 ABCC4O15439 1325 aa15.68■□□□□ 0.1
HDLBP-239ENST00000483086 TOMM70O94826 608 aa15.67■□□□□ 0.1
HDLBP-239ENST00000483086 FKBP4Q02790 459 aaKnown RBP eCLIP15.67■□□□□ 0.1
HDLBP-239ENST00000483086 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
HDLBP-239ENST00000483086 KDM2BQ8NHM5 1336 aa15.67■□□□□ 0.1
HDLBP-239ENST00000483086 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 CACNA1FO60840 1977 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 HSPA6P17066 643 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 ALDH1B1P30837 517 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
HDLBP-239ENST00000483086 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 ZNF541Q9H0D2 1346 aa15.66■□□□□ 0.1
HDLBP-239ENST00000483086 LTBP1Q14766 1721 aa15.65■□□□□ 0.1
HDLBP-239ENST00000483086 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
HDLBP-239ENST00000483086 G2E3Q7L622 706 aa15.65■□□□□ 0.1
HDLBP-239ENST00000483086 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
HDLBP-239ENST00000483086 FAM89AQ96GI7 184 aa15.65■□□□□ 0.1
HDLBP-239ENST00000483086 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
HDLBP-239ENST00000483086 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
HDLBP-239ENST00000483086 SCN4AP35499 1836 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
HDLBP-239ENST00000483086 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 MYH3P11055 1940 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 IL16Q14005 1332 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 SH3TC1Q8TE82 1336 aa15.64■□□□□ 0.09
HDLBP-239ENST00000483086 ADAMTSL1Q8N6G6 1762 aa15.63■□□□□ 0.09
HDLBP-239ENST00000483086 PPEF1O14829 653 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-239ENST00000483086 POTEIP0CG38 1075 aa15.63■□□□□ 0.09
HDLBP-239ENST00000483086 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
HDLBP-239ENST00000483086 HTRA3P83110 453 aa15.63■□□□□ 0.09
HDLBP-239ENST00000483086 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
HDLBP-239ENST00000483086 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
HDLBP-239ENST00000483086 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
HDLBP-239ENST00000483086 RBM17Q96I25 401 aaKnown RBP15.63■□□□□ 0.09
HDLBP-239ENST00000483086 SPEF2Q9C093 1822 aa15.63■□□□□ 0.09
HDLBP-239ENST00000483086 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
HDLBP-239ENST00000483086 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
HDLBP-239ENST00000483086 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
HDLBP-239ENST00000483086 PSMD1Q99460 953 aa15.62■□□□□ 0.09
HDLBP-239ENST00000483086 MYD88Q99836 296 aa15.62■□□□□ 0.09
HDLBP-239ENST00000483086 IGKV5-2P06315 115 aa15.61■□□□□ 0.09
HDLBP-239ENST00000483086 TWISTNBQ3B726 338 aaPredicted RBP15.61■□□□□ 0.09
HDLBP-239ENST00000483086 CCDC30Q5VVM6 783 aa15.61■□□□□ 0.09
HDLBP-239ENST00000483086 FZD9O00144 591 aa15.6■□□□□ 0.09
HDLBP-239ENST00000483086 VEGFAP15692 232 aaPredicted RBP15.6■□□□□ 0.09
HDLBP-239ENST00000483086 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
HDLBP-239ENST00000483086 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
HDLBP-239ENST00000483086 ATP6V0A2Q9Y487 856 aa15.6■□□□□ 0.09
HDLBP-239ENST00000483086 ZNF521Q96K83 1311 aa15.6■□□□□ 0.09
HDLBP-239ENST00000483086 VAMP4O75379 141 aa15.59■□□□□ 0.09
HDLBP-239ENST00000483086 EXOSC9Q06265 439 aaKnown RBP15.59■□□□□ 0.09
HDLBP-239ENST00000483086 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
HDLBP-239ENST00000483086 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
HDLBP-239ENST00000483086 METTL22Q9BUU2 404 aaPredicted RBP15.59■□□□□ 0.09
HDLBP-239ENST00000483086 MAP3K2Q9Y2U5 619 aa15.59■□□□□ 0.09
HDLBP-239ENST00000483086 PI4KAP2A4QPH2 592 aa15.58■□□□□ 0.08
HDLBP-239ENST00000483086 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
HDLBP-239ENST00000483086 GRAPQ13588 217 aa15.58■□□□□ 0.08
HDLBP-239ENST00000483086 SF3B3Q15393 1217 aaKnown RBP15.58■□□□□ 0.08
HDLBP-239ENST00000483086 PI4KAP1Q8N8J0 262 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms