RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 SCN7AQ01118 1682 aa10.65□□□□□ -0.7
SYN3-212ENST00000483062 COL4A5P29400 1685 aa10.64□□□□□ -0.71
SYN3-212ENST00000483062 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
SYN3-212ENST00000483062 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
SYN3-212ENST00000483062 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
SYN3-212ENST00000483062 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
SYN3-212ENST00000483062 RGL2O15211 777 aa10.63□□□□□ -0.71
SYN3-212ENST00000483062 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
SYN3-212ENST00000483062 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
SYN3-212ENST00000483062 MORC1Q86VD1 984 aa10.63□□□□□ -0.71
SYN3-212ENST00000483062 PGAP2Q9UHJ9 254 aa10.63□□□□□ -0.71
SYN3-212ENST00000483062 KIF7Q2M1P5 1343 aa10.62□□□□□ -0.71
SYN3-212ENST00000483062 HMOX1P09601 288 aa10.62□□□□□ -0.71
SYN3-212ENST00000483062 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
SYN3-212ENST00000483062 DZIP3Q86Y13 1208 aaKnown RBP10.62□□□□□ -0.71
SYN3-212ENST00000483062 TTC5Q8N0Z6 440 aa10.62□□□□□ -0.71
SYN3-212ENST00000483062 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
SYN3-212ENST00000483062 COL3A1P02461 1466 aaPredicted RBP10.61□□□□□ -0.71
SYN3-212ENST00000483062 ALDH1B1P30837 517 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 DGKZQ13574 1117 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 TPTE2Q6XPS3 522 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 JDP2Q8WYK2 163 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 ZNF330Q9Y3S2 320 aaPredicted RBP10.61□□□□□ -0.71
SYN3-212ENST00000483062 KNSTRNQ9Y448 316 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
SYN3-212ENST00000483062 KCNQ3O43525 872 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 HOXA10P31260 410 aaPredicted RBP10.6□□□□□ -0.71
SYN3-212ENST00000483062 EIF6P56537 245 aaKnown RBP10.6□□□□□ -0.71
SYN3-212ENST00000483062 GRM1Q13255 1194 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 PRPF38BQ5VTL8 546 aaKnown RBP10.6□□□□□ -0.71
SYN3-212ENST00000483062 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 PAXIP1Q6ZW49 1069 aaPredicted RBP10.6□□□□□ -0.71
SYN3-212ENST00000483062 FMNL2Q96PY5 1086 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 ZIC5Q96T25 663 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 CEMIPQ8WUJ3 1361 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 NPC1L1Q9UHC9 1359 aa10.6□□□□□ -0.71
SYN3-212ENST00000483062 CACNA1SQ13698 1873 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 NPHP1O15259 732 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 LMOD1P29536 600 aaPredicted RBP10.59□□□□□ -0.71
SYN3-212ENST00000483062 CIAPIN1Q6FI81 312 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 CFAP44Q96MT7 982 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 GPRC5DQ9NZD1 345 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 GJA3Q9Y6H8 435 aa10.59□□□□□ -0.71
SYN3-212ENST00000483062 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
SYN3-212ENST00000483062 CELF2O95319 508 aaKnown RBP10.58□□□□□ -0.72
SYN3-212ENST00000483062 PIP4K2AP48426 406 aaPredicted RBP10.58□□□□□ -0.72
SYN3-212ENST00000483062 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYN3-212ENST00000483062 TEFQ10587 303 aa10.58□□□□□ -0.72
SYN3-212ENST00000483062 GRIPAP1Q4V328 841 aa10.58□□□□□ -0.72
SYN3-212ENST00000483062 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
SYN3-212ENST00000483062 SLC51AQ86UW1 340 aa10.58□□□□□ -0.72
SYN3-212ENST00000483062 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
SYN3-212ENST00000483062 ADARB2Q9NS39 739 aaKnown RBP10.58□□□□□ -0.72
SYN3-212ENST00000483062 NIP7Q9Y221 180 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYN3-212ENST00000483062 PRAMEF22A3QJZ6 481 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 GNAT3A8MTJ3 354 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 PER1O15534 1290 aaPredicted RBP10.57□□□□□ -0.72
SYN3-212ENST00000483062 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
SYN3-212ENST00000483062 NOGQ13253 232 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 HLFQ16534 295 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 GLIS2Q9BZE0 524 aaPredicted RBP10.57□□□□□ -0.72
SYN3-212ENST00000483062 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 BCORQ6W2J9 1755 aa10.57□□□□□ -0.72
SYN3-212ENST00000483062 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
SYN3-212ENST00000483062 FAM155AB1AL88 458 aaPredicted RBP10.56□□□□□ -0.72
SYN3-212ENST00000483062 LARGE2Q8N3Y3 721 aa10.56□□□□□ -0.72
SYN3-212ENST00000483062 SPDYE1Q8NFV5 336 aaPredicted RBP10.56□□□□□ -0.72
SYN3-212ENST00000483062 ZC3H15Q8WU90 426 aaKnown RBP10.56□□□□□ -0.72
SYN3-212ENST00000483062 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
SYN3-212ENST00000483062 SAGE1Q9NXZ1 904 aa10.56□□□□□ -0.72
SYN3-212ENST00000483062 DIAPH1O60610 1272 aaKnown RBP10.55□□□□□ -0.72
SYN3-212ENST00000483062 SOX10P56693 466 aa10.55□□□□□ -0.72
SYN3-212ENST00000483062 CXCL9Q07325 125 aa10.55□□□□□ -0.72
SYN3-212ENST00000483062 NPM2Q86SE8 214 aaKnown RBP10.55□□□□□ -0.72
SYN3-212ENST00000483062 RIC1Q4ADV7 1423 aa10.55□□□□□ -0.72
SYN3-212ENST00000483062 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
SYN3-212ENST00000483062 HAX1O00165 279 aa10.54□□□□□ -0.72
SYN3-212ENST00000483062 SNRPA1P09661 255 aaKnown RBP10.54□□□□□ -0.72
SYN3-212ENST00000483062 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
SYN3-212ENST00000483062 TRPM7Q96QT4 1865 aa10.54□□□□□ -0.72
SYN3-212ENST00000483062 CRAMP1Q96RY5 1269 aa10.54□□□□□ -0.72
SYN3-212ENST00000483062 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
SYN3-212ENST00000483062 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
SYN3-212ENST00000483062 DLG5Q8TDM6 1919 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
SYN3-212ENST00000483062 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 ZNRF3Q9ULT6 936 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
SYN3-212ENST00000483062 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 AOC3Q16853 763 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
SYN3-212ENST00000483062 NYXQ9GZU5 481 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms