RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 HLFQ16534 295 aa17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 CCDC30Q5VVM6 783 aa17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 CNKSR1Q969H4 720 aa17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 MASTLQ96GX5 879 aa17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 NIP7Q9Y221 180 aaKnown RBP eCLIP17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 ZNF652Q9Y2D9 606 aa17.09■□□□□ 0.33
ZKSCAN1-204ENST00000482979 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.33
ZKSCAN1-204ENST00000482979 ALDH1L2Q3SY69 923 aa17.08■□□□□ 0.32
ZKSCAN1-204ENST00000482979 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
ZKSCAN1-204ENST00000482979 RGL2O15211 777 aa17.07■□□□□ 0.32
ZKSCAN1-204ENST00000482979 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
ZKSCAN1-204ENST00000482979 CHMP4AQ9BY43 222 aa17.07■□□□□ 0.32
ZKSCAN1-204ENST00000482979 TAOK3Q9H2K8 898 aa17.07■□□□□ 0.32
ZKSCAN1-204ENST00000482979 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
ZKSCAN1-204ENST00000482979 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 ANXA1P04083 346 aa17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 VEGFAP15692 232 aaPredicted RBP17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 MRPL50Q8N5N7 158 aaKnown RBP17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
ZKSCAN1-204ENST00000482979 SLC4A2P04920 1241 aa17.05■□□□□ 0.32
ZKSCAN1-204ENST00000482979 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
ZKSCAN1-204ENST00000482979 NUP98P52948 1817 aa17.05■□□□□ 0.32
ZKSCAN1-204ENST00000482979 NPR1P16066 1061 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 TPTE2Q6XPS3 522 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 MYL6BP14649 208 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 KLRG1Q96E93 195 aa17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
ZKSCAN1-204ENST00000482979 ABCC12Q96J65 1359 aa17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 PLIN1O60240 522 aa17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 G2E3Q7L622 706 aa17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZKSCAN1-204ENST00000482979 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
ZKSCAN1-204ENST00000482979 ERVV-1B6SEH8 477 aa17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 SOGA3Q5TF21 947 aa17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 NUTM1Q86Y26 1132 aa17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.31
ZKSCAN1-204ENST00000482979 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
ZKSCAN1-204ENST00000482979 PDIA6Q15084 440 aa17.01■□□□□ 0.31
ZKSCAN1-204ENST00000482979 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
ZKSCAN1-204ENST00000482979 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
ZKSCAN1-204ENST00000482979 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
ZKSCAN1-204ENST00000482979 FLIIQ13045 1269 aa17■□□□□ 0.31
ZKSCAN1-204ENST00000482979 JMYQ8N9B5 988 aa17■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
ZKSCAN1-204ENST00000482979 SNED1Q8TER0 1413 aa17■□□□□ 0.31
ZKSCAN1-204ENST00000482979 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 POTEJP0CG39 1038 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 AIMP1Q12904 312 aaKnown RBP16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 CRY2Q49AN0 593 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
ZKSCAN1-204ENST00000482979 IPO8O15397 1037 aaKnown RBP16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 GPTP24298 496 aa16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 FKBP5Q13451 457 aaPredicted RBP16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 XAGE3Q8WTP9 111 aa16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
ZKSCAN1-204ENST00000482979 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 SLC51AQ86UW1 340 aa16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 NYXQ9GZU5 481 aa16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ALDH1B1P30837 517 aa16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 IRX6P78412 446 aaPredicted RBP16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 API5Q9BZZ5 524 aaKnown RBP16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 PTPRCP08575 1304 aa16.96■□□□□ 0.31
ZKSCAN1-204ENST00000482979 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 NTSR2O95665 410 aa16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 TRIM27P14373 513 aa16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 GIGYF2Q6Y7W6 1299 aaKnown RBP16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 COPS6Q7L5N1 327 aa16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.3
ZKSCAN1-204ENST00000482979 C20orf194Q5TEA3 1177 aa16.95■□□□□ 0.3
ZKSCAN1-204ENST00000482979 RTKN2Q8IZC4 609 aa16.95■□□□□ 0.3
ZKSCAN1-204ENST00000482979 ARHGAP45Q92619 1136 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms