RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 COL11A2P13942 1736 aaPredicted RBP11.25□□□□□ -0.61
SNX4-205ENST00000482965 IBTKQ9P2D0 1353 aaPredicted RBP11.25□□□□□ -0.61
SNX4-205ENST00000482965 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 CACNA1SQ13698 1873 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 H0YIN7 160 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 GRIN3BO60391 1043 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 NUTM1Q86Y26 1132 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
SNX4-205ENST00000482965 ZNF219Q9P2Y4 722 aaPredicted RBP11.24□□□□□ -0.61
SNX4-205ENST00000482965 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 BCS1LQ9Y276 419 aa11.24□□□□□ -0.61
SNX4-205ENST00000482965 ATP5J2-PTCD1G3V325 749 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 NTSR2O95665 410 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 KCNA3P22001 575 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
SNX4-205ENST00000482965 G2E3Q7L622 706 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNX4-205ENST00000482965 ABCC12Q96J65 1359 aa11.23□□□□□ -0.61
SNX4-205ENST00000482965 FLIIQ13045 1269 aa11.22□□□□□ -0.61
SNX4-205ENST00000482965 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
SNX4-205ENST00000482965 KSR2Q6VAB6 950 aa11.22□□□□□ -0.61
SNX4-205ENST00000482965 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
SNX4-205ENST00000482965 MYD88Q99836 296 aa11.22□□□□□ -0.61
SNX4-205ENST00000482965 ISCA1Q9BUE6 129 aa11.22□□□□□ -0.61
SNX4-205ENST00000482965 TNRC6CQ9HCJ0 1690 aaKnown RBP11.22□□□□□ -0.61
SNX4-205ENST00000482965 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
SNX4-205ENST00000482965 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
SNX4-205ENST00000482965 RNF123Q5XPI4 1314 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 PI4KAP2A4QPH2 592 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 TTLL6Q8N841 843 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 PI4KAP1Q8N8J0 262 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 MASTLQ96GX5 879 aa11.21□□□□□ -0.61
SNX4-205ENST00000482965 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
SNX4-205ENST00000482965 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 ADCY9O60503 1353 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 ABCB7O75027 752 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 SRGNP10124 158 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
SNX4-205ENST00000482965 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 CNKSR1Q969H4 720 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 LAMB2P55268 1798 aa11.2□□□□□ -0.62
SNX4-205ENST00000482965 SLX4Q8IY92 1834 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 ZBED9Q6R2W3 1325 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
SNX4-205ENST00000482965 NPR1P16066 1061 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 CCDC191Q8NCU4 936 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
SNX4-205ENST00000482965 CWC25Q9NXE8 425 aaPredicted RBP11.19□□□□□ -0.62
SNX4-205ENST00000482965 DDX60Q8IY21 1712 aaKnown RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 CT47B1P0C2W7 299 aaPredicted RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 HCLS1P14317 486 aaPredicted RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 RTL5Q5HYW3 569 aaPredicted RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 SLC10A5Q5PT55 438 aa11.18□□□□□ -0.62
SNX4-205ENST00000482965 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
SNX4-205ENST00000482965 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
SNX4-205ENST00000482965 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
SNX4-205ENST00000482965 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
SNX4-205ENST00000482965 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
SNX4-205ENST00000482965 IGKV5-2P06315 115 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 DSG3P32926 999 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 CRY2Q49AN0 593 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 PRPF40BQ6NWY9 871 aaKnown RBP11.17□□□□□ -0.62
SNX4-205ENST00000482965 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 SMC4Q9NTJ3 1288 aa11.17□□□□□ -0.62
SNX4-205ENST00000482965 MYH3P11055 1940 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 NEURL1BA8MQ27 555 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 F6X3S4 739 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
SNX4-205ENST00000482965 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
SNX4-205ENST00000482965 YY1P25490 414 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 CWF19L2Q2TBE0 894 aaKnown RBP11.16□□□□□ -0.62
SNX4-205ENST00000482965 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
SNX4-205ENST00000482965 RBM17Q96I25 401 aaKnown RBP11.16□□□□□ -0.62
SNX4-205ENST00000482965 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
SNX4-205ENST00000482965 SBF1O95248 1867 aa11.15□□□□□ -0.62
SNX4-205ENST00000482965 C21orf2O43822 256 aa11.15□□□□□ -0.62
SNX4-205ENST00000482965 HSP90B1P14625 803 aaKnown RBP11.15□□□□□ -0.62
SNX4-205ENST00000482965 HOXA10P31260 410 aaPredicted RBP11.15□□□□□ -0.62
SNX4-205ENST00000482965 LINS1Q8NG48 757 aa11.15□□□□□ -0.62
SNX4-205ENST00000482965 JARID2Q92833 1246 aaPredicted RBP11.15□□□□□ -0.62
SNX4-205ENST00000482965 TAF1P21675 1872 aa11.15□□□□□ -0.63
SNX4-205ENST00000482965 FER1L6Q2WGJ9 1857 aa11.15□□□□□ -0.63
SNX4-205ENST00000482965 PTPRCP08575 1304 aa11.14□□□□□ -0.63
SNX4-205ENST00000482965 POLA2Q14181 598 aa11.14□□□□□ -0.63
SNX4-205ENST00000482965 SOGA3Q5TF21 947 aa11.14□□□□□ -0.63
SNX4-205ENST00000482965 SLC4A10Q6U841 1118 aa11.14□□□□□ -0.63
SNX4-205ENST00000482965 DDX46Q7L014 1031 aaKnown RBP11.14□□□□□ -0.63
SNX4-205ENST00000482965 CRAMP1Q96RY5 1269 aa11.14□□□□□ -0.63
SNX4-205ENST00000482965 CDHR2Q9BYE9 1310 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms