RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 TNRC6CQ9HCJ0 1690 aaKnown RBP19.46■□□□□ 0.71
COL16A1-213ENST00000482910 TRIM28Q13263 835 aaKnown RBP19.45■□□□□ 0.7
COL16A1-213ENST00000482910 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
COL16A1-213ENST00000482910 ZNF784Q8NCA9 323 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-213ENST00000482910 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
COL16A1-213ENST00000482910 PHAXQ9H814 394 aaKnown RBP19.45■□□□□ 0.7
COL16A1-213ENST00000482910 SPINK5Q9NQ38 1064 aaPredicted RBP19.45■□□□□ 0.7
COL16A1-213ENST00000482910 DDX58O95786 925 aaKnown RBP19.44■□□□□ 0.7
COL16A1-213ENST00000482910 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
COL16A1-213ENST00000482910 SBF1O95248 1867 aa19.43■□□□□ 0.7
COL16A1-213ENST00000482910 VAMP4O75379 141 aa19.43■□□□□ 0.7
COL16A1-213ENST00000482910 EXOSC9Q06265 439 aaKnown RBP19.43■□□□□ 0.7
COL16A1-213ENST00000482910 SOGA3Q5TF21 947 aa19.43■□□□□ 0.7
COL16A1-213ENST00000482910 RIC3Q7Z5B4 369 aa19.43■□□□□ 0.7
COL16A1-213ENST00000482910 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
COL16A1-213ENST00000482910 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
COL16A1-213ENST00000482910 PRPF40BQ6NWY9 871 aaKnown RBP19.42■□□□□ 0.7
COL16A1-213ENST00000482910 FER1L6Q2WGJ9 1857 aa19.41■□□□□ 0.7
COL16A1-213ENST00000482910 HOXA10P31260 410 aaPredicted RBP19.41■□□□□ 0.7
COL16A1-213ENST00000482910 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
COL16A1-213ENST00000482910 E9PSI1 815 aa19.4■□□□□ 0.7
COL16A1-213ENST00000482910 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
COL16A1-213ENST00000482910 NLRP3Q96P20 1036 aa19.4■□□□□ 0.7
COL16A1-213ENST00000482910 TRMT112Q9UI30 125 aaKnown RBP19.4■□□□□ 0.7
COL16A1-213ENST00000482910 C21orf2O43822 256 aa19.39■□□□□ 0.69
COL16A1-213ENST00000482910 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
COL16A1-213ENST00000482910 KSR2Q6VAB6 950 aa19.39■□□□□ 0.69
COL16A1-213ENST00000482910 MIER1Q8N108 512 aa19.39■□□□□ 0.69
COL16A1-213ENST00000482910 METTL22Q9BUU2 404 aaPredicted RBP19.39■□□□□ 0.69
COL16A1-213ENST00000482910 LTBP3Q9NS15 1303 aa19.39■□□□□ 0.69
COL16A1-213ENST00000482910 ATP5J2-PTCD1G3V325 749 aa19.38■□□□□ 0.69
COL16A1-213ENST00000482910 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
COL16A1-213ENST00000482910 RPGRQ92834 1020 aaKnown RBP19.38■□□□□ 0.69
COL16A1-213ENST00000482910 CRAMP1Q96RY5 1269 aa19.38■□□□□ 0.69
COL16A1-213ENST00000482910 LAMB2P55268 1798 aa19.37■□□□□ 0.69
COL16A1-213ENST00000482910 ZC3H4Q9UPT8 1303 aaKnown RBP19.37■□□□□ 0.69
COL16A1-213ENST00000482910 NFKBIEO00221 500 aa19.37■□□□□ 0.69
COL16A1-213ENST00000482910 LMNB1P20700 586 aa19.37■□□□□ 0.69
COL16A1-213ENST00000482910 C9orf131Q5VYM1 1079 aa19.37■□□□□ 0.69
COL16A1-213ENST00000482910 PI4KAP2A4QPH2 592 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
COL16A1-213ENST00000482910 SLFN5Q08AF3 891 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 FLIIQ13045 1269 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 CCDC93Q567U6 631 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 PI4KAP1Q8N8J0 262 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 RBM17Q96I25 401 aaKnown RBP19.36■□□□□ 0.69
COL16A1-213ENST00000482910 MYD88Q99836 296 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
COL16A1-213ENST00000482910 DDX60Q8IY21 1712 aaKnown RBP19.36■□□□□ 0.69
COL16A1-213ENST00000482910 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
COL16A1-213ENST00000482910 RASSF7Q02833 373 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 CC2D2BQ6DHV5 1058 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 C3orf67Q6ZVT6 689 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 G2E3Q7L622 706 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 ZBTB38Q8NAP3 1195 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-213ENST00000482910 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
COL16A1-213ENST00000482910 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
COL16A1-213ENST00000482910 HCLS1P14317 486 aaPredicted RBP19.34■□□□□ 0.69
COL16A1-213ENST00000482910 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
COL16A1-213ENST00000482910 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
COL16A1-213ENST00000482910 TAOK3Q9H2K8 898 aa19.34■□□□□ 0.69
COL16A1-213ENST00000482910 CWC25Q9NXE8 425 aaPredicted RBP19.34■□□□□ 0.69
COL16A1-213ENST00000482910 GRIPAP1Q4V328 841 aa19.33■□□□□ 0.68
COL16A1-213ENST00000482910 TRMT2AQ8IZ69 625 aaKnown RBP19.33■□□□□ 0.68
COL16A1-213ENST00000482910 RTKN2Q8IZC4 609 aa19.33■□□□□ 0.68
COL16A1-213ENST00000482910 ZNF428Q96B54 188 aa19.33■□□□□ 0.68
COL16A1-213ENST00000482910 FAM89AQ96GI7 184 aa19.33■□□□□ 0.68
COL16A1-213ENST00000482910 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
COL16A1-213ENST00000482910 SNED1Q8TER0 1413 aa19.33■□□□□ 0.68
COL16A1-213ENST00000482910 PCCAP05165 728 aaPredicted RBP19.32■□□□□ 0.68
COL16A1-213ENST00000482910 PRELPP51888 382 aa19.32■□□□□ 0.68
COL16A1-213ENST00000482910 FKBP5Q13451 457 aaPredicted RBP19.32■□□□□ 0.68
COL16A1-213ENST00000482910 SF3B3Q15393 1217 aaKnown RBP19.32■□□□□ 0.68
COL16A1-213ENST00000482910 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
COL16A1-213ENST00000482910 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
COL16A1-213ENST00000482910 GPBP1L1Q9HC44 474 aaPredicted RBP19.31■□□□□ 0.68
COL16A1-213ENST00000482910 ABCC4O15439 1325 aa19.3■□□□□ 0.68
COL16A1-213ENST00000482910 BBOX1O75936 387 aa19.3■□□□□ 0.68
COL16A1-213ENST00000482910 FKBP4Q02790 459 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL16A1-213ENST00000482910 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
COL16A1-213ENST00000482910 DNAAF4Q8WXU2 420 aa19.3■□□□□ 0.68
COL16A1-213ENST00000482910 CDHR2Q9BYE9 1310 aa19.29■□□□□ 0.68
COL16A1-213ENST00000482910 TIAM2Q8IVF5 1701 aa19.29■□□□□ 0.68
COL16A1-213ENST00000482910 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-213ENST00000482910 TMC4Q7Z404 712 aa19.29■□□□□ 0.68
COL16A1-213ENST00000482910 PSMD1Q99460 953 aa19.29■□□□□ 0.68
COL16A1-213ENST00000482910 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
COL16A1-213ENST00000482910 CT47B1P0C2W7 299 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-213ENST00000482910 GRAPQ13588 217 aa19.28■□□□□ 0.68
COL16A1-213ENST00000482910 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
COL16A1-213ENST00000482910 GRAPLQ8TC17 118 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-213ENST00000482910 CDCA7LQ96GN5 454 aa19.28■□□□□ 0.68
COL16A1-213ENST00000482910 ATP6V0A2Q9Y487 856 aa19.28■□□□□ 0.68
COL16A1-213ENST00000482910 PDE8AO60658 829 aa19.27■□□□□ 0.68
COL16A1-213ENST00000482910 KDM2BQ8NHM5 1336 aa19.26■□□□□ 0.67
COL16A1-213ENST00000482910 CWF19L2Q2TBE0 894 aaKnown RBP19.26■□□□□ 0.67
COL16A1-213ENST00000482910 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-213ENST00000482910 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
COL16A1-213ENST00000482910 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms