RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 C1QTNF8P60827 252 aa12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 DBF4Q9UBU7 674 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-206ENST00000482745 NFKBIEO00221 500 aa12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 KLRG2A4D1S0 409 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 NTSR2O95665 410 aa12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 TSR2Q969E8 191 aaKnown RBP12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQA1-206ENST00000482745 LMNB1P20700 586 aa12.93□□□□□ -0.34
HLA-DQA1-206ENST00000482745 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
HLA-DQA1-206ENST00000482745 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
HLA-DQA1-206ENST00000482745 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
HLA-DQA1-206ENST00000482745 PRELPP51888 382 aa12.92□□□□□ -0.34
HLA-DQA1-206ENST00000482745 C8orf58Q8NAV2 365 aa12.92□□□□□ -0.34
HLA-DQA1-206ENST00000482745 HYPKQ9NX55 129 aa12.92□□□□□ -0.34
HLA-DQA1-206ENST00000482745 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
HLA-DQA1-206ENST00000482745 RIC1Q4ADV7 1423 aa12.92□□□□□ -0.34
HLA-DQA1-206ENST00000482745 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 CRY2Q49AN0 593 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
HLA-DQA1-206ENST00000482745 LAMB2P55268 1798 aa12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 ALDH1B1P30837 517 aa12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 TSPYL6Q8N831 410 aa12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 KDM2BQ8NHM5 1336 aa12.9□□□□□ -0.34
HLA-DQA1-206ENST00000482745 KIF3CO14782 793 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ZC3H4Q9UPT8 1303 aaKnown RBP12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 CCDC30Q5VVM6 783 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 IL16Q14005 1332 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RNF123Q5XPI4 1314 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ATP5J2-PTCD1G3V325 749 aa12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 CHMP4AQ9BY43 222 aa12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
HLA-DQA1-206ENST00000482745 TCERG1O14776 1098 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-206ENST00000482745 HOXA10P31260 410 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-206ENST00000482745 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQA1-206ENST00000482745 DDX60Q8IY21 1712 aaKnown RBP12.87□□□□□ -0.35
HLA-DQA1-206ENST00000482745 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ISCA1Q9BUE6 129 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 STK31Q9BXU1 1019 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 PPEF1O14829 653 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 WDR63Q8IWG1 891 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RTKN2Q8IZC4 609 aa12.86□□□□□ -0.35
HLA-DQA1-206ENST00000482745 NBR1Q14596 966 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ABCC4O15439 1325 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 DDX58O95786 925 aaKnown RBP12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 MYD88Q99836 296 aa12.85□□□□□ -0.35
HLA-DQA1-206ENST00000482745 TAF1P21675 1872 aa12.84□□□□□ -0.35
HLA-DQA1-206ENST00000482745 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-206ENST00000482745 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
HLA-DQA1-206ENST00000482745 TOMM70O94826 608 aa12.83□□□□□ -0.35
HLA-DQA1-206ENST00000482745 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.35
HLA-DQA1-206ENST00000482745 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
HLA-DQA1-206ENST00000482745 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
HLA-DQA1-206ENST00000482745 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
HLA-DQA1-206ENST00000482745 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
HLA-DQA1-206ENST00000482745 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 IPO9Q96P70 1041 aaKnown RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 TMX4Q9H1E5 349 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 MAP3K2Q9Y2U5 619 aa12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 B4GALNT3Q6L9W6 998 aa12.82□□□□□ -0.36
HLA-DQA1-206ENST00000482745 PSMD1Q99460 953 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms