RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TRMT112Q9UI30 125 aaKnown RBP21.21■□□□□ 0.99
HMGN1-214ENST00000482733 MAP3K2Q9Y2U5 619 aa21.21■□□□□ 0.99
HMGN1-214ENST00000482733 ATP5J2-PTCD1G3V325 749 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 SRGNP10124 158 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-214ENST00000482733 STYK1Q6J9G0 422 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 TTLL6Q8N841 843 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 MASTLQ96GX5 879 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 MYD88Q99836 296 aa21.2■□□□□ 0.98
HMGN1-214ENST00000482733 GOLGB1Q14789 3259 aaKnown RBP21.19■□□□□ 0.98
HMGN1-214ENST00000482733 N4BP2Q86UW6 1770 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-214ENST00000482733 NEXNQ0ZGT2 675 aa21.19■□□□□ 0.98
HMGN1-214ENST00000482733 SLC10A5Q5PT55 438 aa21.19■□□□□ 0.98
HMGN1-214ENST00000482733 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
HMGN1-214ENST00000482733 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
HMGN1-214ENST00000482733 SH3TC1Q8TE82 1336 aa21.19■□□□□ 0.98
HMGN1-214ENST00000482733 ABCC12Q96J65 1359 aa21.19■□□□□ 0.98
HMGN1-214ENST00000482733 NPR1P16066 1061 aa21.18■□□□□ 0.98
HMGN1-214ENST00000482733 CCDC191Q8NCU4 936 aa21.18■□□□□ 0.98
HMGN1-214ENST00000482733 ZBED9Q6R2W3 1325 aa21.18■□□□□ 0.98
HMGN1-214ENST00000482733 ADCY9O60503 1353 aa21.18■□□□□ 0.98
HMGN1-214ENST00000482733 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
HMGN1-214ENST00000482733 NLRP3Q96P20 1036 aa21.17■□□□□ 0.98
HMGN1-214ENST00000482733 ANKRD36CQ5JPF3 1778 aa21.16■□□□□ 0.98
HMGN1-214ENST00000482733 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
HMGN1-214ENST00000482733 CWC25Q9NXE8 425 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-214ENST00000482733 UTRNP46939 3433 aa21.16■□□□□ 0.98
HMGN1-214ENST00000482733 ANKRD31Q8N7Z5 1873 aa21.15■□□□□ 0.98
HMGN1-214ENST00000482733 HSP90B1P14625 803 aaKnown RBP21.15■□□□□ 0.98
HMGN1-214ENST00000482733 ALDH1B1P30837 517 aa21.15■□□□□ 0.98
HMGN1-214ENST00000482733 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
HMGN1-214ENST00000482733 DNAAF4Q8WXU2 420 aa21.15■□□□□ 0.98
HMGN1-214ENST00000482733 ARFGEF2Q9Y6D5 1785 aa21.15■□□□□ 0.98
HMGN1-214ENST00000482733 MRPL50Q8N5N7 158 aaKnown RBP21.14■□□□□ 0.97
HMGN1-214ENST00000482733 SSH1Q8WYL5 1049 aa21.14■□□□□ 0.97
HMGN1-214ENST00000482733 RPGRQ92834 1020 aaKnown RBP21.14■□□□□ 0.97
HMGN1-214ENST00000482733 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
HMGN1-214ENST00000482733 CACNA1FO60840 1977 aa21.12■□□□□ 0.97
HMGN1-214ENST00000482733 PTPRCP08575 1304 aa21.12■□□□□ 0.97
HMGN1-214ENST00000482733 BRCA1P38398 1863 aaKnown RBP21.12■□□□□ 0.97
HMGN1-214ENST00000482733 PCCAP05165 728 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-214ENST00000482733 IGKV5-2P06315 115 aa21.12■□□□□ 0.97
HMGN1-214ENST00000482733 HOXA10P31260 410 aaPredicted RBP21.12■□□□□ 0.97
HMGN1-214ENST00000482733 ARHGAP27Q6ZUM4 889 aa21.12■□□□□ 0.97
HMGN1-214ENST00000482733 DLEC1Q9Y238 1755 aa21.12■□□□□ 0.97
HMGN1-214ENST00000482733 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
HMGN1-214ENST00000482733 HCLS1P14317 486 aaPredicted RBP21.11■□□□□ 0.97
HMGN1-214ENST00000482733 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
HMGN1-214ENST00000482733 PRPF40BQ6NWY9 871 aaKnown RBP21.11■□□□□ 0.97
HMGN1-214ENST00000482733 LINS1Q8NG48 757 aa21.11■□□□□ 0.97
HMGN1-214ENST00000482733 RBM17Q96I25 401 aaKnown RBP21.11■□□□□ 0.97
HMGN1-214ENST00000482733 SMC4Q9NTJ3 1288 aa21.11■□□□□ 0.97
HMGN1-214ENST00000482733 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-214ENST00000482733 SYNE4Q8N205 404 aa21.1■□□□□ 0.97
HMGN1-214ENST00000482733 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
HMGN1-214ENST00000482733 COL11A2P13942 1736 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-214ENST00000482733 CWF19L2Q2TBE0 894 aaKnown RBP21.09■□□□□ 0.97
HMGN1-214ENST00000482733 C3orf67Q6ZVT6 689 aa21.09■□□□□ 0.97
HMGN1-214ENST00000482733 F6X3S4 739 aa21.08■□□□□ 0.97
HMGN1-214ENST00000482733 YY1P25490 414 aa21.08■□□□□ 0.97
HMGN1-214ENST00000482733 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-214ENST00000482733 RTL5Q5HYW3 569 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-214ENST00000482733 TNRC6CQ9HCJ0 1690 aaKnown RBP21.08■□□□□ 0.96
HMGN1-214ENST00000482733 CDHR2Q9BYE9 1310 aa21.07■□□□□ 0.96
HMGN1-214ENST00000482733 C21orf2O43822 256 aa21.07■□□□□ 0.96
HMGN1-214ENST00000482733 RARSP54136 660 aaKnown RBP21.07■□□□□ 0.96
HMGN1-214ENST00000482733 GCKRQ14397 625 aa21.07■□□□□ 0.96
HMGN1-214ENST00000482733 SF3B3Q15393 1217 aaKnown RBP21.07■□□□□ 0.96
HMGN1-214ENST00000482733 BEND3Q5T5X7 828 aa21.07■□□□□ 0.96
HMGN1-214ENST00000482733 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
HMGN1-214ENST00000482733 ARFGEF1Q9Y6D6 1849 aa21.06■□□□□ 0.96
HMGN1-214ENST00000482733 DDX46Q7L014 1031 aaKnown RBP21.06■□□□□ 0.96
HMGN1-214ENST00000482733 H7C1W4 665 aa21.05■□□□□ 0.96
HMGN1-214ENST00000482733 PDE8AO60658 829 aa21.05■□□□□ 0.96
HMGN1-214ENST00000482733 ALDH1L1O75891 902 aa21.05■□□□□ 0.96
HMGN1-214ENST00000482733 CC2D2BQ6DHV5 1058 aa21.05■□□□□ 0.96
HMGN1-214ENST00000482733 C7orf43Q8WVR3 580 aa21.05■□□□□ 0.96
HMGN1-214ENST00000482733 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
HMGN1-214ENST00000482733 SLC4A10Q6U841 1118 aa21.04■□□□□ 0.96
HMGN1-214ENST00000482733 SRCIN1Q9C0H9 1055 aa21.04■□□□□ 0.96
HMGN1-214ENST00000482733 ZNF219Q9P2Y4 722 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-214ENST00000482733 BBOX1O75936 387 aa21.03■□□□□ 0.96
HMGN1-214ENST00000482733 GRIPAP1Q4V328 841 aa21.03■□□□□ 0.96
HMGN1-214ENST00000482733 TMX4Q9H1E5 349 aaPredicted RBP21.03■□□□□ 0.96
HMGN1-214ENST00000482733 ABCC4O15439 1325 aa21.03■□□□□ 0.96
HMGN1-214ENST00000482733 KIF16BQ96L93 1317 aa21.03■□□□□ 0.96
HMGN1-214ENST00000482733 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-214ENST00000482733 GRAPQ13588 217 aa21.02■□□□□ 0.96
HMGN1-214ENST00000482733 CCDC152Q4G0S7 254 aa21.02■□□□□ 0.96
HMGN1-214ENST00000482733 UBE3BQ7Z3V4 1068 aa21.02■□□□□ 0.96
HMGN1-214ENST00000482733 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
HMGN1-214ENST00000482733 GRAPLQ8TC17 118 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-214ENST00000482733 JARID2Q92833 1246 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-214ENST00000482733 API5Q9BZZ5 524 aaKnown RBP21.02■□□□□ 0.96
HMGN1-214ENST00000482733 TMC4Q7Z404 712 aa21.01■□□□□ 0.95
HMGN1-214ENST00000482733 TAOK3Q9H2K8 898 aa21.01■□□□□ 0.95
HMGN1-214ENST00000482733 NOB1Q9ULX3 412 aaKnown RBP21.01■□□□□ 0.95
HMGN1-214ENST00000482733 LTBP3Q9NS15 1303 aa21.01■□□□□ 0.95
HMGN1-214ENST00000482733 NFKBIEO00221 500 aa21■□□□□ 0.95
HMGN1-214ENST00000482733 ARHGAP45Q92619 1136 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms