RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PPP1R42Q7Z4L9 355 aa25.23■■□□□ 1.63
TRAPPC12-220ENST00000482645 CNBD1Q8NA66 436 aa25.23■■□□□ 1.63
TRAPPC12-220ENST00000482645 NEURL1BA8MQ27 555 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 NUTM1Q86Y26 1132 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 FTSJ3Q8IY81 847 aaKnown RBP25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 LINS1Q8NG48 757 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 UTP14AQ9BVJ6 771 aaKnown RBP25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 CWC25Q9NXE8 425 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 PPP1R1BQ9UD71 204 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 TRMT112Q9UI30 125 aaKnown RBP25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 TPTE2Q6XPS3 522 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 CCDC191Q8NCU4 936 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 SRCIN1Q9C0H9 1055 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 NYXQ9GZU5 481 aa25.22■■□□□ 1.63
TRAPPC12-220ENST00000482645 NTSR2O95665 410 aa25.2■■□□□ 1.62
TRAPPC12-220ENST00000482645 IRX6P78412 446 aaPredicted RBP25.2■■□□□ 1.62
TRAPPC12-220ENST00000482645 TRIM28Q13263 835 aaKnown RBP25.2■■□□□ 1.62
TRAPPC12-220ENST00000482645 PRR5LQ6MZQ0 368 aa25.2■■□□□ 1.62
TRAPPC12-220ENST00000482645 JARID2Q92833 1246 aaPredicted RBP25.2■■□□□ 1.62
TRAPPC12-220ENST00000482645 PXDNLA1KZ92 1463 aa25.19■■□□□ 1.62
TRAPPC12-220ENST00000482645 ST5P78524 1137 aa25.19■■□□□ 1.62
TRAPPC12-220ENST00000482645 ABCC4O15439 1325 aa25.19■■□□□ 1.62
TRAPPC12-220ENST00000482645 N4BP2Q86UW6 1770 aaPredicted RBP25.19■■□□□ 1.62
TRAPPC12-220ENST00000482645 NEFLP07196 543 aa25.18■■□□□ 1.62
TRAPPC12-220ENST00000482645 ERFEQ4G0M1 354 aa25.18■■□□□ 1.62
TRAPPC12-220ENST00000482645 DZIP1LQ8IYY4 767 aaKnown RBP25.18■■□□□ 1.62
TRAPPC12-220ENST00000482645 FAM89AQ96GI7 184 aa25.18■■□□□ 1.62
TRAPPC12-220ENST00000482645 NRXN2Q9P2S2 1712 aa25.18■■□□□ 1.62
TRAPPC12-220ENST00000482645 CCT4P50991 539 aaKnown RBP25.17■■□□□ 1.62
TRAPPC12-220ENST00000482645 GCKRQ14397 625 aa25.17■■□□□ 1.62
TRAPPC12-220ENST00000482645 SYNE4Q8N205 404 aa25.17■■□□□ 1.62
TRAPPC12-220ENST00000482645 SH3TC1Q8TE82 1336 aa25.17■■□□□ 1.62
TRAPPC12-220ENST00000482645 IBTKQ9P2D0 1353 aaPredicted RBP25.17■■□□□ 1.62
TRAPPC12-220ENST00000482645 ALDH1L1O75891 902 aa25.16■■□□□ 1.62
TRAPPC12-220ENST00000482645 RLBP1P12271 317 aa25.16■■□□□ 1.62
TRAPPC12-220ENST00000482645 PANK1Q8TE04 598 aa25.16■■□□□ 1.62
TRAPPC12-220ENST00000482645 ABCC12Q96J65 1359 aa25.16■■□□□ 1.62
TRAPPC12-220ENST00000482645 C20orf194Q5TEA3 1177 aa25.15■■□□□ 1.62
TRAPPC12-220ENST00000482645 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
TRAPPC12-220ENST00000482645 ZBTB38Q8NAP3 1195 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC12-220ENST00000482645 C9orf78Q9NZ63 289 aaPredicted RBP25.15■■□□□ 1.62
TRAPPC12-220ENST00000482645 UBE3BQ7Z3V4 1068 aa25.14■■□□□ 1.62
TRAPPC12-220ENST00000482645 LRP5O75197 1615 aa25.14■■□□□ 1.61
TRAPPC12-220ENST00000482645 C10orf71Q711Q0 1435 aa25.13■■□□□ 1.61
TRAPPC12-220ENST00000482645 HCLS1P14317 486 aaPredicted RBP25.13■■□□□ 1.61
TRAPPC12-220ENST00000482645 ITPRIPQ8IWB1 547 aa25.13■■□□□ 1.61
TRAPPC12-220ENST00000482645 PCCAP05165 728 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC12-220ENST00000482645 INTS3Q68E01 1043 aaKnown RBP25.12■■□□□ 1.61
TRAPPC12-220ENST00000482645 GRM8O00222 908 aa25.12■■□□□ 1.61
TRAPPC12-220ENST00000482645 MS4A1P11836 297 aa25.12■■□□□ 1.61
TRAPPC12-220ENST00000482645 IRS4O14654 1257 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC12-220ENST00000482645 FHDC1Q9C0D6 1143 aaPredicted RBP25.11■■□□□ 1.61
TRAPPC12-220ENST00000482645 ANKRD31Q8N7Z5 1873 aa25.1■■□□□ 1.61
TRAPPC12-220ENST00000482645 BRIP1Q9BX63 1249 aa25.1■■□□□ 1.61
TRAPPC12-220ENST00000482645 H7C1W4 665 aa25.09■■□□□ 1.61
TRAPPC12-220ENST00000482645 TNRC6CQ9HCJ0 1690 aaKnown RBP25.09■■□□□ 1.61
TRAPPC12-220ENST00000482645 NBPF7P0C2Y1 421 aaPredicted RBP25.08■■□□□ 1.61
TRAPPC12-220ENST00000482645 COG6Q9Y2V7 657 aa25.08■■□□□ 1.61
TRAPPC12-220ENST00000482645 DDX60Q8IY21 1712 aaKnown RBP25.08■■□□□ 1.6
TRAPPC12-220ENST00000482645 PDE6BP35913 854 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 PDE3AQ14432 1141 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 USP44Q9H0E7 712 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 CD2APQ9Y5K6 639 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 C3orf67Q6ZVT6 689 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 NLRP3Q96P20 1036 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 MEIS3Q99687 375 aa25.07■■□□□ 1.6
TRAPPC12-220ENST00000482645 CDHR2Q9BYE9 1310 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 GOLGB1Q14789 3259 aaKnown RBP25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 CHRNA5P30532 468 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 CASP7P55210 303 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 SLC10A5Q5PT55 438 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 C2CD5Q86YS7 1000 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 NLGN2Q8NFZ4 835 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 CRBNQ96SW2 442 aa25.06■■□□□ 1.6
TRAPPC12-220ENST00000482645 LAMB2P55268 1798 aa25.05■■□□□ 1.6
TRAPPC12-220ENST00000482645 A0A0G2JLW4 131 aa25.05■■□□□ 1.6
TRAPPC12-220ENST00000482645 PDE8AO60658 829 aa25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 UBTFL1P0CB47 393 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 HSP90B1P14625 803 aaKnown RBP25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 MVPQ14764 893 aaKnown RBP25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 CCDC85AQ96PX6 553 aaPredicted RBP25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 WWC3Q9ULE0 1092 aa25.04■■□□□ 1.6
TRAPPC12-220ENST00000482645 H0YIN7 160 aa25.03■■□□□ 1.6
TRAPPC12-220ENST00000482645 SYT17Q9BSW7 474 aa25.03■■□□□ 1.6
TRAPPC12-220ENST00000482645 UTYO14607 1347 aa25.03■■□□□ 1.6
TRAPPC12-220ENST00000482645 COL11A2P13942 1736 aaPredicted RBP25.03■■□□□ 1.6
TRAPPC12-220ENST00000482645 DPEP1P16444 411 aa25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 TGFB2P61812 414 aa25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 SUCLG2Q96I99 432 aa25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 RIC1Q4ADV7 1423 aa25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 RPGRQ92834 1020 aaKnown RBP25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 ZNF622Q969S3 477 aaKnown RBP eCLIP25.02■■□□□ 1.6
TRAPPC12-220ENST00000482645 GNAI3P08754 354 aa25.01■■□□□ 1.59
TRAPPC12-220ENST00000482645 CTSWP56202 376 aa25.01■■□□□ 1.59
TRAPPC12-220ENST00000482645 MYH3P11055 1940 aa25■■□□□ 1.59
TRAPPC12-220ENST00000482645 EXOC6Q8TAG9 804 aa25■■□□□ 1.59
TRAPPC12-220ENST00000482645 DDX19BQ9UMR2 479 aa25■■□□□ 1.59
TRAPPC12-220ENST00000482645 CHMP3Q9Y3E7 222 aa25■■□□□ 1.59
TRAPPC12-220ENST00000482645 KIAA1551Q9HCM1 1747 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms