RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 UTP14AQ9BVJ6 771 aaKnown RBP15.8■□□□□ 0.12
FAM3D-202ENST00000482623 TMX4Q9H1E5 349 aaPredicted RBP15.8■□□□□ 0.12
FAM3D-202ENST00000482623 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
FAM3D-202ENST00000482623 BBOX1O75936 387 aa15.79■□□□□ 0.12
FAM3D-202ENST00000482623 CALD1Q05682 793 aaKnown RBP15.79■□□□□ 0.12
FAM3D-202ENST00000482623 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
FAM3D-202ENST00000482623 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
FAM3D-202ENST00000482623 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
FAM3D-202ENST00000482623 LAMB4A4D0S4 1761 aa15.79■□□□□ 0.12
FAM3D-202ENST00000482623 COL11A2P13942 1736 aaPredicted RBP15.78■□□□□ 0.12
FAM3D-202ENST00000482623 GPTP24298 496 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 TCIRG1Q13488 830 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 COPS6Q7L5N1 327 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 GPC2Q8N158 579 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 ZNF277Q9NRM2 450 aaPredicted RBP15.78■□□□□ 0.12
FAM3D-202ENST00000482623 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
FAM3D-202ENST00000482623 ARFGEF2Q9Y6D5 1785 aa15.77■□□□□ 0.12
FAM3D-202ENST00000482623 DICER1Q9UPY3 1922 aaKnown RBP15.77■□□□□ 0.12
FAM3D-202ENST00000482623 TAF1DQ9H5J8 278 aaPredicted RBP15.77■□□□□ 0.12
FAM3D-202ENST00000482623 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
FAM3D-202ENST00000482623 DBF4Q9UBU7 674 aaPredicted RBP15.77■□□□□ 0.12
FAM3D-202ENST00000482623 SNED1Q8TER0 1413 aa15.77■□□□□ 0.11
FAM3D-202ENST00000482623 ABCC12Q96J65 1359 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 TRIM28Q13263 835 aaKnown RBP15.76■□□□□ 0.11
FAM3D-202ENST00000482623 TMC4Q7Z404 712 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 HYPKQ9NX55 129 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 HACL1Q9UJ83 578 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 ATP6V0A2Q9Y487 856 aa15.76■□□□□ 0.11
FAM3D-202ENST00000482623 EIF6P56537 245 aaKnown RBP15.75■□□□□ 0.11
FAM3D-202ENST00000482623 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
FAM3D-202ENST00000482623 SUPT20HQ8NEM7 779 aa15.75■□□□□ 0.11
FAM3D-202ENST00000482623 PLBD2Q8NHP8 589 aa15.75■□□□□ 0.11
FAM3D-202ENST00000482623 XAGE3Q8WTP9 111 aa15.75■□□□□ 0.11
FAM3D-202ENST00000482623 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
FAM3D-202ENST00000482623 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
FAM3D-202ENST00000482623 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
FAM3D-202ENST00000482623 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
FAM3D-202ENST00000482623 ANKRD13DQ6ZTN6 518 aa15.74■□□□□ 0.11
FAM3D-202ENST00000482623 SP8Q8IXZ3 490 aa15.74■□□□□ 0.11
FAM3D-202ENST00000482623 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
FAM3D-202ENST00000482623 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
FAM3D-202ENST00000482623 GNAI1P63096 354 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
FAM3D-202ENST00000482623 HDGFL1Q5TGJ6 251 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 OLFM4Q6UX06 510 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 IFT57Q9NWB7 429 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 TRMT112Q9UI30 125 aaKnown RBP15.73■□□□□ 0.11
FAM3D-202ENST00000482623 TIAM2Q8IVF5 1701 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 NUP98P52948 1817 aa15.73■□□□□ 0.11
FAM3D-202ENST00000482623 SH3TC1Q8TE82 1336 aa15.72■□□□□ 0.11
FAM3D-202ENST00000482623 PASKQ96RG2 1323 aa15.72■□□□□ 0.11
FAM3D-202ENST00000482623 CCDC88AQ3V6T2 1871 aa15.72■□□□□ 0.11
FAM3D-202ENST00000482623 EPHX2P34913 555 aa15.72■□□□□ 0.11
FAM3D-202ENST00000482623 HTRA3P83110 453 aa15.72■□□□□ 0.11
FAM3D-202ENST00000482623 DDX46Q7L014 1031 aaKnown RBP15.72■□□□□ 0.11
FAM3D-202ENST00000482623 ITGBL1O95965 494 aaPredicted RBP15.71■□□□□ 0.11
FAM3D-202ENST00000482623 AIMP1Q12904 312 aaKnown RBP15.71■□□□□ 0.11
FAM3D-202ENST00000482623 LARGE2Q8N3Y3 721 aa15.71■□□□□ 0.11
FAM3D-202ENST00000482623 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
FAM3D-202ENST00000482623 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
FAM3D-202ENST00000482623 SCN4AP35499 1836 aa15.71■□□□□ 0.1
FAM3D-202ENST00000482623 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
FAM3D-202ENST00000482623 ANXA1P04083 346 aa15.7■□□□□ 0.1
FAM3D-202ENST00000482623 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
FAM3D-202ENST00000482623 DUSP27Q5VZP5 1158 aa15.7■□□□□ 0.1
FAM3D-202ENST00000482623 CHPF2Q9P2E5 772 aa15.7■□□□□ 0.1
FAM3D-202ENST00000482623 PCNTO95613 3336 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
FAM3D-202ENST00000482623 GRAPQ13588 217 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 USP50Q70EL3 339 aaPredicted RBP15.69■□□□□ 0.1
FAM3D-202ENST00000482623 NIM1KQ8IY84 436 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 GRAPLQ8TC17 118 aaPredicted RBP15.69■□□□□ 0.1
FAM3D-202ENST00000482623 MBIPQ9NS73 344 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 ZNRF3Q9ULT6 936 aa15.69■□□□□ 0.1
FAM3D-202ENST00000482623 ABCC4O15439 1325 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 TMEM88BA6NKF7 163 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 APAF1O14727 1248 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 MPNDQ8N594 471 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 NECTIN2Q92692 538 aa15.68■□□□□ 0.1
FAM3D-202ENST00000482623 PPIP5K2O43314 1243 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 HCLS1P14317 486 aaPredicted RBP15.67■□□□□ 0.1
FAM3D-202ENST00000482623 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
FAM3D-202ENST00000482623 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
FAM3D-202ENST00000482623 CNTROBQ8N137 903 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
FAM3D-202ENST00000482623 TNIP1Q15025 636 aa15.66■□□□□ 0.1
FAM3D-202ENST00000482623 EAPPQ56P03 285 aaPredicted RBP15.66■□□□□ 0.1
FAM3D-202ENST00000482623 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
FAM3D-202ENST00000482623 CNTNAP1P78357 1384 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms