RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 IRS1P35568 1242 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 USP5P45974 858 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 CDKN1CP49918 316 aaPredicted RBP9.71□□□□□ -0.85
RBM39-233ENST00000482563 GDF10P55107 478 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 UBE4AQ14139 1066 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 PRPF38AQ8NAV1 312 aaKnown RBP9.71□□□□□ -0.85
RBM39-233ENST00000482563 GINM1Q9NU53 330 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 MSRB2Q9Y3D2 182 aa9.71□□□□□ -0.85
RBM39-233ENST00000482563 WASLO00401 505 aaPredicted RBP9.7□□□□□ -0.86
RBM39-233ENST00000482563 PSEN2P49810 448 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 MMP16P51512 607 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 JAMLQ86YT9 394 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 EMID1Q96A84 441 aaPredicted RBP9.7□□□□□ -0.86
RBM39-233ENST00000482563 TMEM260Q9NX78 707 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 SERTAD1Q9UHV2 236 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 POTEB2H3BUK9 544 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 MAFGO15525 162 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 MYCP01106 439 aaPredicted RBP9.7□□□□□ -0.86
RBM39-233ENST00000482563 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 C11orf96Q7Z7L8 435 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 STAG2Q8N3U4 1231 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 EPS8L3Q8TE67 593 aaKnown RBP9.7□□□□□ -0.86
RBM39-233ENST00000482563 FOXJ1Q92949 421 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 DNAJC25Q9H1X3 360 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 METRNQ9UJH8 293 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 PNMA2Q9UL42 364 aa9.7□□□□□ -0.86
RBM39-233ENST00000482563 A6NHS1 94 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 SH3BP5O60239 455 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 NR1I2O75469 434 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 POU3F3P20264 500 aaPredicted RBP9.69□□□□□ -0.86
RBM39-233ENST00000482563 HOMER1Q86YM7 354 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 KIAA0825Q8IV33 1275 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
RBM39-233ENST00000482563 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
RBM39-233ENST00000482563 BACH1O14867 736 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 USP17L7P0C7H9 530 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 NOS2P35228 1153 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 SOX9P48436 509 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 USPL1Q5W0Q7 1092 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 SEPT12Q8IYM1 358 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 CELF2-AS1Q8N7Q2 184 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 EAF1Q96JC9 268 aaPredicted RBP9.68□□□□□ -0.86
RBM39-233ENST00000482563 A0A0U1RQG5 324 aaPredicted RBP9.68□□□□□ -0.86
RBM39-233ENST00000482563 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 GNALP38405 381 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 BRDTQ58F21 947 aaPredicted RBP9.68□□□□□ -0.86
RBM39-233ENST00000482563 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
RBM39-233ENST00000482563 INHAP05111 366 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 ZAP70P43403 619 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 ZFYVE27Q5T4F4 411 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 CCDC136Q96JN2 1154 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 SLC4A9Q96Q91 983 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 ETNK1Q9HBU6 452 aa9.67□□□□□ -0.86
RBM39-233ENST00000482563 SCHIP1Q9P0W5 487 aaPredicted RBP9.67□□□□□ -0.86
RBM39-233ENST00000482563 F6X3S4 739 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 C16orf86Q6ZW13 317 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 FEZ1Q99689 392 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 OSBPL3Q9H4L5 887 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 PRKAG3Q9UGI9 489 aa9.66□□□□□ -0.86
RBM39-233ENST00000482563 RAB15P59190 212 aa9.65□□□□□ -0.86
RBM39-233ENST00000482563 LONRF3Q496Y0 759 aa9.65□□□□□ -0.86
RBM39-233ENST00000482563 C1QTNF2Q9BXJ5 285 aa9.65□□□□□ -0.86
RBM39-233ENST00000482563 CCDC113Q9H0I3 377 aa9.65□□□□□ -0.86
RBM39-233ENST00000482563 GIPC1O14908 333 aa9.65□□□□□ -0.87
RBM39-233ENST00000482563 CPNE3O75131 537 aaKnown RBP9.65□□□□□ -0.87
RBM39-233ENST00000482563 EXOSC10Q01780 885 aaKnown RBP9.65□□□□□ -0.87
RBM39-233ENST00000482563 CCSAPQ6IQ19 270 aaPredicted RBP9.65□□□□□ -0.87
RBM39-233ENST00000482563 POTEAQ6S8J7 498 aa9.65□□□□□ -0.87
RBM39-233ENST00000482563 CEP89Q96ST8 783 aa9.65□□□□□ -0.87
RBM39-233ENST00000482563 GNL3LQ9NVN8 582 aaKnown RBP9.65□□□□□ -0.87
RBM39-233ENST00000482563 STRIP2Q9ULQ0 834 aa9.65□□□□□ -0.87
RBM39-233ENST00000482563 USP3Q9Y6I4 520 aa9.65□□□□□ -0.87
RBM39-233ENST00000482563 FOXD4Q12950 439 aaPredicted RBP9.64□□□□□ -0.87
RBM39-233ENST00000482563 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
RBM39-233ENST00000482563 WDR75Q8IWA0 830 aaKnown RBP9.64□□□□□ -0.87
RBM39-233ENST00000482563 CCDC74AQ96AQ1 378 aa9.64□□□□□ -0.87
RBM39-233ENST00000482563 ANAPC16Q96DE5 110 aa9.64□□□□□ -0.87
RBM39-233ENST00000482563 IL17RAQ96F46 866 aa9.64□□□□□ -0.87
RBM39-233ENST00000482563 SLC4A5Q9BY07 1137 aa9.64□□□□□ -0.87
RBM39-233ENST00000482563 ERVK-9P63128 1117 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 BPHLQ86WA6 291 aaPredicted RBP9.63□□□□□ -0.87
RBM39-233ENST00000482563 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 RELTQ969Z4 430 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 NUDT16Q96DE0 195 aaKnown RBP9.63□□□□□ -0.87
RBM39-233ENST00000482563 ZFRQ96KR1 1074 aaKnown RBP9.63□□□□□ -0.87
RBM39-233ENST00000482563 APBA2Q99767 749 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 CHST12Q9NRB3 414 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 TCEAL9Q9UHQ7 104 aa9.63□□□□□ -0.87
RBM39-233ENST00000482563 KCNQ2O43526 872 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 NFE2Q16621 373 aaPredicted RBP9.62□□□□□ -0.87
RBM39-233ENST00000482563 SH3PXD2AQ5TCZ1 1133 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 CLEC4GQ6UXB4 293 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 BAP1Q92560 729 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 RSRP1Q9BUV0 290 aa9.62□□□□□ -0.87
RBM39-233ENST00000482563 CCDC189A1A4V9 331 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms