RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 SUSD4Q5VX71 490 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 NBPF5PQ86XG9 351 aaPredicted RBP16.77■□□□□ 0.28
HDAC1-208ENST00000482310 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
HDAC1-208ENST00000482310 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
HDAC1-208ENST00000482310 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
HDAC1-208ENST00000482310 SERPINB2P05120 415 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 TM4SF1P30408 202 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
HDAC1-208ENST00000482310 NLRP10Q86W26 655 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
HDAC1-208ENST00000482310 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 TAF1P21675 1872 aa16.76■□□□□ 0.27
HDAC1-208ENST00000482310 ABCC4O15439 1325 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 RLBP1P12271 317 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-208ENST00000482310 BEND3Q5T5X7 828 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 DZIP1LQ8IYY4 767 aaKnown RBP16.75■□□□□ 0.27
HDAC1-208ENST00000482310 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 ARHGAP45Q92619 1136 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 SRCIN1Q9C0H9 1055 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 CWC25Q9NXE8 425 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-208ENST00000482310 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
HDAC1-208ENST00000482310 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
HDAC1-208ENST00000482310 PPP1R42Q7Z4L9 355 aa16.74■□□□□ 0.27
HDAC1-208ENST00000482310 SYNE4Q8N205 404 aa16.74■□□□□ 0.27
HDAC1-208ENST00000482310 CNBD1Q8NA66 436 aa16.74■□□□□ 0.27
HDAC1-208ENST00000482310 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
HDAC1-208ENST00000482310 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
HDAC1-208ENST00000482310 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
HDAC1-208ENST00000482310 NTSR2O95665 410 aa16.73■□□□□ 0.27
HDAC1-208ENST00000482310 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
HDAC1-208ENST00000482310 PARP10Q53GL7 1025 aa16.73■□□□□ 0.27
HDAC1-208ENST00000482310 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
HDAC1-208ENST00000482310 ZNF784Q8NCA9 323 aaPredicted RBP16.73■□□□□ 0.27
HDAC1-208ENST00000482310 ABCC12Q96J65 1359 aa16.73■□□□□ 0.27
HDAC1-208ENST00000482310 RGL2O15211 777 aa16.72■□□□□ 0.27
HDAC1-208ENST00000482310 CCT4P50991 539 aaKnown RBP16.72■□□□□ 0.27
HDAC1-208ENST00000482310 IRX6P78412 446 aaPredicted RBP16.72■□□□□ 0.27
HDAC1-208ENST00000482310 GCKRQ14397 625 aa16.72■□□□□ 0.27
HDAC1-208ENST00000482310 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
HDAC1-208ENST00000482310 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
HDAC1-208ENST00000482310 ST5P78524 1137 aa16.71■□□□□ 0.27
HDAC1-208ENST00000482310 PRR5LQ6MZQ0 368 aa16.71■□□□□ 0.27
HDAC1-208ENST00000482310 UBE3BQ7Z3V4 1068 aa16.71■□□□□ 0.27
HDAC1-208ENST00000482310 NYXQ9GZU5 481 aa16.71■□□□□ 0.27
HDAC1-208ENST00000482310 C9orf78Q9NZ63 289 aaPredicted RBP16.71■□□□□ 0.27
HDAC1-208ENST00000482310 COG6Q9Y2V7 657 aa16.71■□□□□ 0.27
HDAC1-208ENST00000482310 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
HDAC1-208ENST00000482310 DLEC1Q9Y238 1755 aa16.7■□□□□ 0.26
HDAC1-208ENST00000482310 ALDH1L1O75891 902 aa16.7■□□□□ 0.26
HDAC1-208ENST00000482310 HCLS1P14317 486 aaPredicted RBP16.7■□□□□ 0.26
HDAC1-208ENST00000482310 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
HDAC1-208ENST00000482310 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
HDAC1-208ENST00000482310 DCAF8L1A6NGE4 600 aa16.69■□□□□ 0.26
HDAC1-208ENST00000482310 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
HDAC1-208ENST00000482310 C10orf71Q711Q0 1435 aa16.69■□□□□ 0.26
HDAC1-208ENST00000482310 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-208ENST00000482310 GRM8O00222 908 aa16.68■□□□□ 0.26
HDAC1-208ENST00000482310 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-208ENST00000482310 MS4A1P11836 297 aa16.68■□□□□ 0.26
HDAC1-208ENST00000482310 TRIM28Q13263 835 aaKnown RBP16.68■□□□□ 0.26
HDAC1-208ENST00000482310 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
HDAC1-208ENST00000482310 CHD4Q14839 1912 aa16.68■□□□□ 0.26
HDAC1-208ENST00000482310 BRCA1P38398 1863 aaKnown RBP16.67■□□□□ 0.26
HDAC1-208ENST00000482310 PCCAP05165 728 aaPredicted RBP16.67■□□□□ 0.26
HDAC1-208ENST00000482310 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
HDAC1-208ENST00000482310 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
HDAC1-208ENST00000482310 MEIS3Q99687 375 aa16.67■□□□□ 0.26
HDAC1-208ENST00000482310 WWC3Q9ULE0 1092 aa16.67■□□□□ 0.26
HDAC1-208ENST00000482310 MVPQ14764 893 aaKnown RBP16.66■□□□□ 0.26
HDAC1-208ENST00000482310 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
HDAC1-208ENST00000482310 H7C1W4 665 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 CRBNQ96SW2 442 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 C1orf115Q9H7X2 142 aa16.65■□□□□ 0.26
HDAC1-208ENST00000482310 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.25
HDAC1-208ENST00000482310 CHRNA5P30532 468 aa16.64■□□□□ 0.25
HDAC1-208ENST00000482310 CHMP3Q9Y3E7 222 aa16.64■□□□□ 0.25
HDAC1-208ENST00000482310 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
HDAC1-208ENST00000482310 COL4A1P02462 1669 aa16.63■□□□□ 0.25
HDAC1-208ENST00000482310 CASP7P55210 303 aa16.63■□□□□ 0.25
HDAC1-208ENST00000482310 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
HDAC1-208ENST00000482310 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
HDAC1-208ENST00000482310 CDHR2Q9BYE9 1310 aa16.63■□□□□ 0.25
HDAC1-208ENST00000482310 SLX4Q8IY92 1834 aa16.62■□□□□ 0.25
HDAC1-208ENST00000482310 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
HDAC1-208ENST00000482310 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
HDAC1-208ENST00000482310 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
HDAC1-208ENST00000482310 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
HDAC1-208ENST00000482310 A0A0G2JLW4 131 aa16.61■□□□□ 0.25
HDAC1-208ENST00000482310 PDE8AO60658 829 aa16.61■□□□□ 0.25
HDAC1-208ENST00000482310 PDE6BP35913 854 aa16.61■□□□□ 0.25
HDAC1-208ENST00000482310 CTSWP56202 376 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms