RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 GLTPD2A6NH11 291 aa25.73■■□□□ 1.71
MSH5-215ENST00000482280 TCIRG1Q13488 830 aa25.73■■□□□ 1.71
MSH5-215ENST00000482280 ANKRD13DQ6ZTN6 518 aa25.73■■□□□ 1.71
MSH5-215ENST00000482280 RRAGCQ9HB90 399 aa25.73■■□□□ 1.71
MSH5-215ENST00000482280 RIC1Q4ADV7 1423 aa25.72■■□□□ 1.71
MSH5-215ENST00000482280 ELL2O00472 640 aaPredicted RBP25.72■■□□□ 1.71
MSH5-215ENST00000482280 CRY2Q49AN0 593 aa25.72■■□□□ 1.71
MSH5-215ENST00000482280 PLBD2Q8NHP8 589 aa25.72■■□□□ 1.71
MSH5-215ENST00000482280 SBF1O95248 1867 aa25.72■■□□□ 1.71
MSH5-215ENST00000482280 TRMT112Q9UI30 125 aaKnown RBP25.71■■□□□ 1.71
MSH5-215ENST00000482280 SLX4Q8IY92 1834 aa25.71■■□□□ 1.71
MSH5-215ENST00000482280 CACNA1SQ13698 1873 aa25.7■■□□□ 1.71
MSH5-215ENST00000482280 ARFGEF2Q9Y6D5 1785 aa25.7■■□□□ 1.7
MSH5-215ENST00000482280 HSPA6P17066 643 aa25.7■■□□□ 1.7
MSH5-215ENST00000482280 PRELPP51888 382 aa25.7■■□□□ 1.7
MSH5-215ENST00000482280 FKBP4Q02790 459 aaKnown RBP eCLIP25.7■■□□□ 1.7
MSH5-215ENST00000482280 GOLGA2Q08379 1002 aa25.7■■□□□ 1.7
MSH5-215ENST00000482280 CC2D2BQ6DHV5 1058 aa25.7■■□□□ 1.7
MSH5-215ENST00000482280 VEGFAP15692 232 aaPredicted RBP25.69■■□□□ 1.7
MSH5-215ENST00000482280 CCDC27Q2M243 656 aa25.69■■□□□ 1.7
MSH5-215ENST00000482280 NLRP10Q86W26 655 aa25.69■■□□□ 1.7
MSH5-215ENST00000482280 RBM46Q8TBY0 533 aaKnown RBP25.69■■□□□ 1.7
MSH5-215ENST00000482280 C7orf43Q8WVR3 580 aa25.69■■□□□ 1.7
MSH5-215ENST00000482280 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
MSH5-215ENST00000482280 HOXA10P31260 410 aaPredicted RBP25.68■■□□□ 1.7
MSH5-215ENST00000482280 GRIPAP1Q4V328 841 aa25.68■■□□□ 1.7
MSH5-215ENST00000482280 CCDC30Q5VVM6 783 aa25.68■■□□□ 1.7
MSH5-215ENST00000482280 RIC3Q7Z5B4 369 aa25.68■■□□□ 1.7
MSH5-215ENST00000482280 CRAMP1Q96RY5 1269 aa25.68■■□□□ 1.7
MSH5-215ENST00000482280 TIAM2Q8IVF5 1701 aa25.67■■□□□ 1.7
MSH5-215ENST00000482280 TNRC6CQ9HCJ0 1690 aaKnown RBP25.67■■□□□ 1.7
MSH5-215ENST00000482280 FER1L6Q2WGJ9 1857 aa25.66■■□□□ 1.7
MSH5-215ENST00000482280 PPEF1O14829 653 aaPredicted RBP25.66■■□□□ 1.7
MSH5-215ENST00000482280 SLC10A5Q5PT55 438 aa25.66■■□□□ 1.7
MSH5-215ENST00000482280 WWC1Q8IX03 1113 aa25.66■■□□□ 1.7
MSH5-215ENST00000482280 DDX58O95786 925 aaKnown RBP25.65■■□□□ 1.7
MSH5-215ENST00000482280 STK31Q9BXU1 1019 aa25.65■■□□□ 1.7
MSH5-215ENST00000482280 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
MSH5-215ENST00000482280 FSTL1Q12841 308 aa25.64■■□□□ 1.7
MSH5-215ENST00000482280 C8orf58Q8NAV2 365 aa25.64■■□□□ 1.7
MSH5-215ENST00000482280 TCERG1O14776 1098 aaKnown RBP25.63■■□□□ 1.69
MSH5-215ENST00000482280 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
MSH5-215ENST00000482280 OLFM4Q6UX06 510 aa25.63■■□□□ 1.69
MSH5-215ENST00000482280 DDX46Q7L014 1031 aaKnown RBP25.63■■□□□ 1.69
MSH5-215ENST00000482280 SYNE4Q8N205 404 aa25.63■■□□□ 1.69
MSH5-215ENST00000482280 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
MSH5-215ENST00000482280 TSR2Q969E8 191 aaKnown RBP25.63■■□□□ 1.69
MSH5-215ENST00000482280 ATP5J2-PTCD1G3V325 749 aa25.62■■□□□ 1.69
MSH5-215ENST00000482280 HCLS1P14317 486 aaPredicted RBP25.62■■□□□ 1.69
MSH5-215ENST00000482280 APLP1P51693 650 aa25.62■■□□□ 1.69
MSH5-215ENST00000482280 SMC1BQ8NDV3 1235 aa25.62■■□□□ 1.69
MSH5-215ENST00000482280 SALL2Q9Y467 1007 aaPredicted RBP25.62■■□□□ 1.69
MSH5-215ENST00000482280 CCDC88AQ3V6T2 1871 aa25.62■■□□□ 1.69
MSH5-215ENST00000482280 IL16Q14005 1332 aa25.62■■□□□ 1.69
MSH5-215ENST00000482280 ANKRD36CQ5JPF3 1778 aa25.61■■□□□ 1.69
MSH5-215ENST00000482280 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
MSH5-215ENST00000482280 IARSP41252 1262 aaKnown RBP25.61■■□□□ 1.69
MSH5-215ENST00000482280 FAM9BQ8IZU0 186 aa25.61■■□□□ 1.69
MSH5-215ENST00000482280 PSMD1Q99460 953 aa25.61■■□□□ 1.69
MSH5-215ENST00000482280 C3orf67Q6ZVT6 689 aa25.6■■□□□ 1.69
MSH5-215ENST00000482280 ZNF428Q96B54 188 aa25.59■■□□□ 1.69
MSH5-215ENST00000482280 ISCA1Q9BUE6 129 aa25.59■■□□□ 1.69
MSH5-215ENST00000482280 PHAXQ9H814 394 aaKnown RBP25.59■■□□□ 1.69
MSH5-215ENST00000482280 IQCA1LA6NCM1 817 aa25.58■■□□□ 1.69
MSH5-215ENST00000482280 BBOX1O75936 387 aa25.58■■□□□ 1.69
MSH5-215ENST00000482280 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
MSH5-215ENST00000482280 DDNO94850 711 aaPredicted RBP25.57■■□□□ 1.68
MSH5-215ENST00000482280 FAM89AQ96GI7 184 aa25.57■■□□□ 1.68
MSH5-215ENST00000482280 ATP6V0A2Q9Y487 856 aa25.57■■□□□ 1.68
MSH5-215ENST00000482280 ABCC4O15439 1325 aa25.57■■□□□ 1.68
MSH5-215ENST00000482280 TRIM28Q13263 835 aaKnown RBP25.56■■□□□ 1.68
MSH5-215ENST00000482280 WDR63Q8IWG1 891 aa25.56■■□□□ 1.68
MSH5-215ENST00000482280 TSPYL6Q8N831 410 aa25.56■■□□□ 1.68
MSH5-215ENST00000482280 SUPT20HQ8NEM7 779 aa25.56■■□□□ 1.68
MSH5-215ENST00000482280 MYD88Q99836 296 aa25.56■■□□□ 1.68
MSH5-215ENST00000482280 DICER1Q9UPY3 1922 aaKnown RBP25.56■■□□□ 1.68
MSH5-215ENST00000482280 EIF6P56537 245 aaKnown RBP25.55■■□□□ 1.68
MSH5-215ENST00000482280 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
MSH5-215ENST00000482280 LARGE2Q8N3Y3 721 aa25.55■■□□□ 1.68
MSH5-215ENST00000482280 NEXNQ0ZGT2 675 aa25.54■■□□□ 1.68
MSH5-215ENST00000482280 GRAPQ13588 217 aa25.54■■□□□ 1.68
MSH5-215ENST00000482280 TMC4Q7Z404 712 aa25.54■■□□□ 1.68
MSH5-215ENST00000482280 GRAPLQ8TC17 118 aaPredicted RBP25.54■■□□□ 1.68
MSH5-215ENST00000482280 IRS4O14654 1257 aaPredicted RBP25.53■■□□□ 1.68
MSH5-215ENST00000482280 DPP8Q6V1X1 898 aaPredicted RBP25.53■■□□□ 1.68
MSH5-215ENST00000482280 WDR90Q96KV7 1748 aa25.52■■□□□ 1.68
MSH5-215ENST00000482280 SP8Q8IXZ3 490 aa25.52■■□□□ 1.68
MSH5-215ENST00000482280 NIM1KQ8IY84 436 aa25.52■■□□□ 1.68
MSH5-215ENST00000482280 ZBTB38Q8NAP3 1195 aaPredicted RBP25.52■■□□□ 1.68
MSH5-215ENST00000482280 CCDC191Q8NCU4 936 aa25.52■■□□□ 1.68
MSH5-215ENST00000482280 CWC25Q9NXE8 425 aaPredicted RBP25.52■■□□□ 1.68
MSH5-215ENST00000482280 PPIP5K2O43314 1243 aa25.51■■□□□ 1.67
MSH5-215ENST00000482280 METTL22Q9BUU2 404 aaPredicted RBP25.51■■□□□ 1.67
MSH5-215ENST00000482280 MYH16Q9H6N6 1097 aa25.51■■□□□ 1.67
MSH5-215ENST00000482280 MAP3K2Q9Y2U5 619 aa25.51■■□□□ 1.67
MSH5-215ENST00000482280 FANCIQ9NVI1 1328 aa25.51■■□□□ 1.67
MSH5-215ENST00000482280 FZD9O00144 591 aa25.5■■□□□ 1.67
MSH5-215ENST00000482280 KSR2Q6VAB6 950 aa25.5■■□□□ 1.67
MSH5-215ENST00000482280 MPNDQ8N594 471 aa25.5■■□□□ 1.67
MSH5-215ENST00000482280 VPS33BQ9H267 617 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms