RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 COL4A5P29400 1685 aa20.13■□□□□ 0.81
HDAC6-224ENST00000481929 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
HDAC6-224ENST00000481929 DGKZQ13574 1117 aa20.11■□□□□ 0.81
HDAC6-224ENST00000481929 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
HDAC6-224ENST00000481929 SNRPA1P09661 255 aaKnown RBP20.1■□□□□ 0.81
HDAC6-224ENST00000481929 BRPF1P55201 1214 aaPredicted RBP20.1■□□□□ 0.81
HDAC6-224ENST00000481929 CRY2Q49AN0 593 aa20.1■□□□□ 0.81
HDAC6-224ENST00000481929 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
HDAC6-224ENST00000481929 SAPCD2Q86UD0 394 aa20.1■□□□□ 0.81
HDAC6-224ENST00000481929 CASP8AP2Q9UKL3 1982 aa20.1■□□□□ 0.81
HDAC6-224ENST00000481929 CELF2O95319 508 aaKnown RBP20.09■□□□□ 0.81
HDAC6-224ENST00000481929 NIM1KQ8IY84 436 aa20.09■□□□□ 0.81
HDAC6-224ENST00000481929 ADARB2Q9NS39 739 aaKnown RBP20.09■□□□□ 0.81
HDAC6-224ENST00000481929 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
HDAC6-224ENST00000481929 HHIPL1Q96JK4 782 aa20.08■□□□□ 0.81
HDAC6-224ENST00000481929 NYXQ9GZU5 481 aa20.08■□□□□ 0.81
HDAC6-224ENST00000481929 ABCC12Q96J65 1359 aa20.08■□□□□ 0.8
HDAC6-224ENST00000481929 COL3A1P02461 1466 aaPredicted RBP20.07■□□□□ 0.8
HDAC6-224ENST00000481929 NBPF26B4DH59 902 aa20.07■□□□□ 0.8
HDAC6-224ENST00000481929 HLFQ16534 295 aa20.07■□□□□ 0.8
HDAC6-224ENST00000481929 NBPF10Q6P3W6 841 aaKnown RBP20.07■□□□□ 0.8
HDAC6-224ENST00000481929 NBPF15Q8N660 670 aa20.07■□□□□ 0.8
HDAC6-224ENST00000481929 GPRC5DQ9NZD1 345 aa20.06■□□□□ 0.8
HDAC6-224ENST00000481929 CIAPIN1Q6FI81 312 aa20.05■□□□□ 0.8
HDAC6-224ENST00000481929 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
HDAC6-224ENST00000481929 TNRC18O15417 2968 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-224ENST00000481929 PPEF1O14829 653 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-224ENST00000481929 PPIP5K2O43314 1243 aa20.04■□□□□ 0.8
HDAC6-224ENST00000481929 HOXA10P31260 410 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-224ENST00000481929 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
HDAC6-224ENST00000481929 GLIS2Q9BZE0 524 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-224ENST00000481929 RBM17Q96I25 401 aaKnown RBP20.03■□□□□ 0.8
HDAC6-224ENST00000481929 ZNF408Q9H9D4 720 aa20.03■□□□□ 0.8
HDAC6-224ENST00000481929 KIF7Q2M1P5 1343 aa20.02■□□□□ 0.8
HDAC6-224ENST00000481929 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
HDAC6-224ENST00000481929 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
HDAC6-224ENST00000481929 NOGQ13253 232 aa20.02■□□□□ 0.8
HDAC6-224ENST00000481929 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
HDAC6-224ENST00000481929 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
HDAC6-224ENST00000481929 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
HDAC6-224ENST00000481929 PRKAR2BP31323 418 aa20.01■□□□□ 0.79
HDAC6-224ENST00000481929 AOC3Q16853 763 aa20.01■□□□□ 0.79
HDAC6-224ENST00000481929 CRAMP1Q96RY5 1269 aa20.01■□□□□ 0.79
HDAC6-224ENST00000481929 TMX4Q9H1E5 349 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-224ENST00000481929 IBTKQ9P2D0 1353 aaPredicted RBP20■□□□□ 0.79
HDAC6-224ENST00000481929 GMPSP49915 693 aaPredicted RBP20■□□□□ 0.79
HDAC6-224ENST00000481929 SLC51AQ86UW1 340 aa20■□□□□ 0.79
HDAC6-224ENST00000481929 VPS33BQ9H267 617 aa20■□□□□ 0.79
HDAC6-224ENST00000481929 CLSPNQ9HAW4 1339 aa20■□□□□ 0.79
HDAC6-224ENST00000481929 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 CXCL9Q07325 125 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 MCM10Q7L590 875 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 ZC3H15Q8WU90 426 aaKnown RBP19.99■□□□□ 0.79
HDAC6-224ENST00000481929 PGAP2Q9UHJ9 254 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 ZNRF3Q9ULT6 936 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 CDHR2Q9BYE9 1310 aa19.99■□□□□ 0.79
HDAC6-224ENST00000481929 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
HDAC6-224ENST00000481929 SOX10P56693 466 aa19.98■□□□□ 0.79
HDAC6-224ENST00000481929 CDC37L1Q7L3B6 337 aa19.98■□□□□ 0.79
HDAC6-224ENST00000481929 NGEFQ8N5V2 710 aa19.98■□□□□ 0.79
HDAC6-224ENST00000481929 RSPH6AQ9H0K4 717 aa19.98■□□□□ 0.79
HDAC6-224ENST00000481929 MAP3K15Q6ZN16 1313 aa19.98■□□□□ 0.79
HDAC6-224ENST00000481929 GPTP24298 496 aa19.97■□□□□ 0.79
HDAC6-224ENST00000481929 SUPT20HQ8NEM7 779 aa19.97■□□□□ 0.79
HDAC6-224ENST00000481929 ZIC5Q96T25 663 aa19.97■□□□□ 0.79
HDAC6-224ENST00000481929 BCL2L13Q9BXK5 485 aa19.97■□□□□ 0.79
HDAC6-224ENST00000481929 HUNKP57058 714 aa19.96■□□□□ 0.79
HDAC6-224ENST00000481929 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
HDAC6-224ENST00000481929 NUP98P52948 1817 aa19.96■□□□□ 0.79
HDAC6-224ENST00000481929 UBN2Q6ZU65 1347 aa19.96■□□□□ 0.79
HDAC6-224ENST00000481929 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
HDAC6-224ENST00000481929 PRPF38BQ5VTL8 546 aaKnown RBP19.95■□□□□ 0.78
HDAC6-224ENST00000481929 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
HDAC6-224ENST00000481929 HIRAP54198 1017 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-224ENST00000481929 CNGB1Q14028 1251 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-224ENST00000481929 TNIP1Q15025 636 aa19.94■□□□□ 0.78
HDAC6-224ENST00000481929 SUSD4Q5VX71 490 aa19.94■□□□□ 0.78
HDAC6-224ENST00000481929 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
HDAC6-224ENST00000481929 SAGE1Q9NXZ1 904 aa19.94■□□□□ 0.78
HDAC6-224ENST00000481929 NTSR2O95665 410 aa19.93■□□□□ 0.78
HDAC6-224ENST00000481929 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
HDAC6-224ENST00000481929 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
HDAC6-224ENST00000481929 C3orf67Q6ZVT6 689 aa19.93■□□□□ 0.78
HDAC6-224ENST00000481929 RTFDC1Q9BY42 306 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-224ENST00000481929 RAD17O75943 681 aa19.92■□□□□ 0.78
HDAC6-224ENST00000481929 TAF7Q15545 349 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-224ENST00000481929 DPP8Q6V1X1 898 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-224ENST00000481929 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
HDAC6-224ENST00000481929 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
HDAC6-224ENST00000481929 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
HDAC6-224ENST00000481929 ZBTB3Q9H5J0 574 aa19.92■□□□□ 0.78
HDAC6-224ENST00000481929 H7C1D1 291 aa19.91■□□□□ 0.78
HDAC6-224ENST00000481929 HTATSF1O43719 755 aaKnown RBP19.91■□□□□ 0.78
HDAC6-224ENST00000481929 KIAA2012Q0VF49 1180 aa19.91■□□□□ 0.78
HDAC6-224ENST00000481929 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-224ENST00000481929 RGMBQ6NW40 437 aa19.91■□□□□ 0.78
HDAC6-224ENST00000481929 PPP1R42Q7Z4L9 355 aa19.91■□□□□ 0.78
HDAC6-224ENST00000481929 CNOT7Q9UIV1 285 aaKnown RBP19.91■□□□□ 0.78
HDAC6-224ENST00000481929 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
HDAC6-224ENST00000481929 RRP7AQ9Y3A4 280 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms