RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 NMRK2Q9NPI5 230 aa9.96□□□□□ -0.82
MECP2-208ENST00000481807 TMOD3Q9NYL9 352 aa9.96□□□□□ -0.82
MECP2-208ENST00000481807 PI4KAP2A4QPH2 592 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 HMMRO75330 724 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 ALDH1L1O75891 902 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 HSPA1AP0DMV8 641 aaKnown RBP9.95□□□□□ -0.82
MECP2-208ENST00000481807 HSPA1BP0DMV9 641 aaKnown RBP9.95□□□□□ -0.82
MECP2-208ENST00000481807 HTRA3P83110 453 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 PROSER3Q2NL68 480 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 BEND3Q5T5X7 828 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 LHX8Q68G74 356 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 PI4KAP1Q8N8J0 262 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 BACH2Q9BYV9 841 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
MECP2-208ENST00000481807 CCNL1Q9UK58 526 aaPredicted RBP9.95□□□□□ -0.82
MECP2-208ENST00000481807 ITGB4P16144 1822 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 KIF13BQ9NQT8 1826 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 PDE4AP27815 886 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 RGS3P49796 1198 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 KCNQ4P56696 695 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 SKAP1Q86WV1 359 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 LINS1Q8NG48 757 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 TEX13AQ9BXU3 409 aaPredicted RBP9.94□□□□□ -0.82
MECP2-208ENST00000481807 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 DCTPP1Q9H773 170 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 USP16Q9Y5T5 823 aa9.94□□□□□ -0.82
MECP2-208ENST00000481807 UTYO14607 1347 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 ANXA1P04083 346 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 UBTFL1P0CB47 393 aaPredicted RBP9.93□□□□□ -0.82
MECP2-208ENST00000481807 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
MECP2-208ENST00000481807 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 CHD1LQ86WJ1 897 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 PIGBQ92521 554 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 HDAC5Q9UQL6 1122 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 MAP3K2Q9Y2U5 619 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
MECP2-208ENST00000481807 TAF1LQ8IZX4 1826 aa9.92□□□□□ -0.82
MECP2-208ENST00000481807 C16orf71Q8IYS4 520 aaPredicted RBP9.92□□□□□ -0.82
MECP2-208ENST00000481807 KIAA1551Q9HCM1 1747 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 ATP8B2P98198 1209 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 MTX1Q13505 466 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 XAGE3Q8WTP9 111 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
MECP2-208ENST00000481807 COL15A1P39059 1388 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 TNRC6CQ9HCJ0 1690 aaKnown RBP9.9□□□□□ -0.82
MECP2-208ENST00000481807 TGFB2P61812 414 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 NEXNQ0ZGT2 675 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 ANKRD13DQ6ZTN6 518 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 COPS6Q7L5N1 327 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 SMC1BQ8NDV3 1235 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 PLBD2Q8NHP8 589 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 METTL22Q9BUU2 404 aaPredicted RBP9.9□□□□□ -0.82
MECP2-208ENST00000481807 ASAP1Q9ULH1 1129 aa9.9□□□□□ -0.82
MECP2-208ENST00000481807 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
MECP2-208ENST00000481807 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 GRM8O00222 908 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 PTCD1O75127 700 aaKnown RBP9.89□□□□□ -0.83
MECP2-208ENST00000481807 STARD3NLO95772 234 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 MYL6BP14649 208 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 ANKRD45Q5TZF3 282 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
MECP2-208ENST00000481807 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 LNPKQ9C0E8 428 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
MECP2-208ENST00000481807 FARP1Q9Y4F1 1045 aaPredicted RBP9.89□□□□□ -0.83
MECP2-208ENST00000481807 BRCA1P38398 1863 aaKnown RBP9.89□□□□□ -0.83
MECP2-208ENST00000481807 ARFGEF2Q9Y6D5 1785 aa9.88□□□□□ -0.83
MECP2-208ENST00000481807 C4BP0C0L5 1744 aa9.88□□□□□ -0.83
MECP2-208ENST00000481807 ZNF831Q5JPB2 1677 aa9.88□□□□□ -0.83
MECP2-208ENST00000481807 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
MECP2-208ENST00000481807 IGKV5-2P06315 115 aa9.88□□□□□ -0.83
MECP2-208ENST00000481807 NBPF7P0C2Y1 421 aaPredicted RBP9.88□□□□□ -0.83
MECP2-208ENST00000481807 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
MECP2-208ENST00000481807 ZC3H4Q9UPT8 1303 aaKnown RBP9.87□□□□□ -0.83
MECP2-208ENST00000481807 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 PNMA6EA0A0J9YXQ4 647 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 A1BGP04217 495 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 SSFA2P28290 1259 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
MECP2-208ENST00000481807 GCKRQ14397 625 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 BMP2KLQ5H9B9 411 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 C9orf78Q9NZ63 289 aaPredicted RBP9.87□□□□□ -0.83
MECP2-208ENST00000481807 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
MECP2-208ENST00000481807 TJP1Q07157 1748 aa9.87□□□□□ -0.83
MECP2-208ENST00000481807 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
MECP2-208ENST00000481807 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
MECP2-208ENST00000481807 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
MECP2-208ENST00000481807 HSP90AB4PQ58FF6 505 aa9.86□□□□□ -0.83
MECP2-208ENST00000481807 AMIGO3Q86WK7 504 aa9.86□□□□□ -0.83
MECP2-208ENST00000481807 DNAJC10Q8IXB1 793 aa9.86□□□□□ -0.83
MECP2-208ENST00000481807 SMARCC1Q92922 1105 aaPredicted RBP9.86□□□□□ -0.83
MECP2-208ENST00000481807 SLC4A9Q96Q91 983 aa9.86□□□□□ -0.83
MECP2-208ENST00000481807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
MECP2-208ENST00000481807 GABBR2O75899 941 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms