RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-205ENST00000481788 GIGYF2Q6Y7W6 1299 aaKnown RBP9.62□□□□□ -0.87
RBM28-205ENST00000481788 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
RBM28-205ENST00000481788 SLC27A5Q9Y2P5 690 aa9.62□□□□□ -0.87
RBM28-205ENST00000481788 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
RBM28-205ENST00000481788 DOT1LQ8TEK3 1739 aa9.62□□□□□ -0.87
RBM28-205ENST00000481788 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
RBM28-205ENST00000481788 TOMM70O94826 608 aa9.61□□□□□ -0.87
RBM28-205ENST00000481788 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
RBM28-205ENST00000481788 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
RBM28-205ENST00000481788 SMIM5Q71RC9 77 aa9.6□□□□□ -0.87
RBM28-205ENST00000481788 PARP9Q8IXQ6 854 aa9.6□□□□□ -0.87
RBM28-205ENST00000481788 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
RBM28-205ENST00000481788 L3MBTL2Q969R5 705 aa9.6□□□□□ -0.87
RBM28-205ENST00000481788 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
RBM28-205ENST00000481788 USP47Q96K76 1375 aa9.6□□□□□ -0.87
RBM28-205ENST00000481788 LTN1O94822 1766 aa9.6□□□□□ -0.87
RBM28-205ENST00000481788 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
RBM28-205ENST00000481788 HOXA2O43364 376 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 S1PR4O95977 384 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 HTRA3P83110 453 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 FLAD1Q8NFF5 587 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 WWC3Q9ULE0 1092 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 PALLDQ8WX93 1383 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 PXDNLA1KZ92 1463 aa9.59□□□□□ -0.87
RBM28-205ENST00000481788 FBLN1P23142 703 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 HOXC9P31274 260 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 ANKLE1Q8NAG6 615 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 KLRG1Q96E93 195 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 PRKD2Q9BZL6 878 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 SLC12A5Q9H2X9 1139 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 NMRK2Q9NPI5 230 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
RBM28-205ENST00000481788 A0A1W2PP64 1363 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 C5P01031 1676 aa9.58□□□□□ -0.88
RBM28-205ENST00000481788 KIAA1551Q9HCM1 1747 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 RNF223E7ERA6 249 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 PRELPP51888 382 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 PDE4DQ08499 809 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 THAP11Q96EK4 314 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
RBM28-205ENST00000481788 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
RBM28-205ENST00000481788 BRICD5Q6PL45 260 aa9.56□□□□□ -0.88
RBM28-205ENST00000481788 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
RBM28-205ENST00000481788 NSD3Q9BZ95 1437 aa9.56□□□□□ -0.88
RBM28-205ENST00000481788 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
RBM28-205ENST00000481788 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
RBM28-205ENST00000481788 CYP27B1O15528 508 aa9.55□□□□□ -0.88
RBM28-205ENST00000481788 MSS51Q4VC12 460 aa9.55□□□□□ -0.88
RBM28-205ENST00000481788 BEGAINQ9BUH8 593 aa9.55□□□□□ -0.88
RBM28-205ENST00000481788 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
RBM28-205ENST00000481788 CGNL1Q0VF96 1302 aa9.55□□□□□ -0.88
RBM28-205ENST00000481788 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
RBM28-205ENST00000481788 WDR90Q96KV7 1748 aa9.54□□□□□ -0.88
RBM28-205ENST00000481788 SSFA2P28290 1259 aa9.54□□□□□ -0.88
RBM28-205ENST00000481788 LINC00116Q8NCU8 138 aa9.54□□□□□ -0.88
RBM28-205ENST00000481788 C10orf71Q711Q0 1435 aa9.54□□□□□ -0.88
RBM28-205ENST00000481788 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 RTL1A6NKG5 1358 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 KCNA3P22001 575 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 ITPK1Q13572 414 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 RNF19BQ6ZMZ0 732 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 USHBP1Q8N6Y0 703 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 PIGBQ92521 554 aa9.53□□□□□ -0.88
RBM28-205ENST00000481788 MAP2P11137 1827 aaKnown RBP9.53□□□□□ -0.88
RBM28-205ENST00000481788 KIF13BQ9NQT8 1826 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 MMP10P09238 476 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 TGFB2P61812 414 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 FSTL1Q12841 308 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 NCAPD2Q15021 1401 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 MPRIPQ6WCQ1 1025 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
RBM28-205ENST00000481788 TNS4Q8IZW8 715 aa9.52□□□□□ -0.89
RBM28-205ENST00000481788 PUS7Q96PZ0 661 aaKnown RBP9.52□□□□□ -0.89
RBM28-205ENST00000481788 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
RBM28-205ENST00000481788 RGPD2P0DJD1 1756 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
RBM28-205ENST00000481788 FDX1P10109 184 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 MS4A1P11836 297 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 SLC19A1P41440 591 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 SIK1P57059 783 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 TMC1Q8TDI8 760 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 HLA-CQ95604 372 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 PCDH11XQ9BZA7 1347 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 PCDH11YQ9BZA8 1340 aa9.51□□□□□ -0.89
RBM28-205ENST00000481788 DPEP1P16444 411 aa9.5□□□□□ -0.89
RBM28-205ENST00000481788 HMGB2P26583 209 aaKnown RBP9.5□□□□□ -0.89
RBM28-205ENST00000481788 RRS1Q15050 365 aaKnown RBP9.5□□□□□ -0.89
RBM28-205ENST00000481788 FAM160A2Q8N612 972 aaPredicted RBP9.5□□□□□ -0.89
RBM28-205ENST00000481788 SMARCC1Q92922 1105 aaPredicted RBP9.5□□□□□ -0.89
RBM28-205ENST00000481788 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
RBM28-205ENST00000481788 KDRP35968 1356 aa9.5□□□□□ -0.89
RBM28-205ENST00000481788 AMPHP49418 695 aa9.49□□□□□ -0.89
RBM28-205ENST00000481788 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
RBM28-205ENST00000481788 C9orf131Q5VYM1 1079 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms