RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173		A0A0A0MRY4	1105 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	C9orf172	C9J069	976 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	C21orf2	O43822	256 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	MBTPS1	Q14703	1052 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	SHISA2	Q6UWI4	295 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	NGLY1	Q96IV0	654 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	ZNF594	Q96JF6	807 aa	Predicted RBP	7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	ZFP64	Q9NPA5	681 aa		7.59	□□□□□ -1.19
CCNL1-223	ENST00000481173	ADGRE1	Q14246	886 aa		7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	ARTN	Q5T4W7	220 aa		7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	BTLA	Q7Z6A9	289 aa		7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	ALDH16A1	Q8IZ83	802 aa		7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	LARGE2	Q8N3Y3	721 aa		7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	MKRN1	Q9UHC7	482 aa	Known RBP	7.58	□□□□□ -1.2
CCNL1-223	ENST00000481173	RAD21	O60216	631 aa		7.57	□□□□□ -1.2
CCNL1-223	ENST00000481173	ELN	P15502	786 aa		7.57	□□□□□ -1.2
CCNL1-223	ENST00000481173	HDGFL1	Q5TGJ6	251 aa		7.57	□□□□□ -1.2
CCNL1-223	ENST00000481173	TXNRD3	Q86VQ6	643 aa		7.57	□□□□□ -1.2
CCNL1-223	ENST00000481173	CHMP7	Q8WUX9	453 aa	Predicted RBP	7.57	□□□□□ -1.2
CCNL1-223	ENST00000481173	PALM3	A6NDB9	673 aa	Predicted RBP	7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173		M0R2N6	131 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	ATP9B	O43861	1147 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	RAC1	P63000	192 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	PSAPL1	Q6NUJ1	521 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	SIX5	Q8N196	739 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	SCG3	Q8WXD2	468 aa	Known RBP	7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	DNAJB12	Q9NXW2	375 aa	Known RBP	7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	NAGPA	Q9UK23	515 aa		7.56	□□□□□ -1.2
CCNL1-223	ENST00000481173	LGR5	O75473	907 aa		7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	DKK1	O94907	266 aa		7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	AFF1	P51825	1210 aa	Known RBP	7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	TP53INP1	Q96A56	240 aa		7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	LENG1	Q96BZ8	264 aa	Predicted RBP	7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	RBM19	Q9Y4C8	960 aa	Known RBP	7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	ATAD2	Q6PL18	1390 aa		7.55	□□□□□ -1.2
CCNL1-223	ENST00000481173	H2AFB1	P0C5Y9	115 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	H2AFB2	P0C5Z0	115 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	NFKB1	P19838	968 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	NBPF11	Q86T75	865 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	GAS2L2	Q8NHY3	880 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	PNMA5	Q96PV4	448 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	GSX2	Q9BZM3	304 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	USP21	Q9UK80	565 aa		7.54	□□□□□ -1.2
CCNL1-223	ENST00000481173	UBTF	P17480	764 aa	Known RBP	7.53	□□□□□ -1.2
CCNL1-223	ENST00000481173	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.53	□□□□□ -1.2
CCNL1-223	ENST00000481173	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.53	□□□□□ -1.2
CCNL1-223	ENST00000481173	RGS9	O75916	674 aa	Predicted RBP	7.52	□□□□□ -1.21
CCNL1-223	ENST00000481173	RASA1	P20936	1047 aa		7.52	□□□□□ -1.21
CCNL1-223	ENST00000481173	NRG1	Q02297	640 aa	Predicted RBP	7.52	□□□□□ -1.21
CCNL1-223	ENST00000481173	CPB1	P15086	417 aa		7.51	□□□□□ -1.21
CCNL1-223	ENST00000481173	CCIN	Q13939	588 aa		7.51	□□□□□ -1.21
CCNL1-223	ENST00000481173	HIF1A	Q16665	826 aa		7.51	□□□□□ -1.21
CCNL1-223	ENST00000481173	BCS1L	Q9Y276	419 aa		7.51	□□□□□ -1.21
CCNL1-223	ENST00000481173	GRN	P28799	593 aa	Known RBP	7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	LRP8	Q14114	963 aa		7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	KRT25	Q7Z3Z0	450 aa		7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	FAM35A	Q86V20	835 aa		7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	STAG2	Q8N3U4	1231 aa		7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.5	□□□□□ -1.21
CCNL1-223	ENST00000481173	TGFBR3L	H3BV60	316 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	SEC13	P55735	322 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	PLAUR	Q03405	335 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	RTN1	Q16799	776 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	IER5	Q5VY09	327 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	ILDR2	Q71H61	639 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	HINFP	Q9BQA5	517 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	EFCC1	Q9HA90	598 aa		7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	DMGDH	Q9UI17	866 aa	Known RBP	7.49	□□□□□ -1.21
CCNL1-223	ENST00000481173	HYAL3	O43820	417 aa	Predicted RBP	7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	MLLT1	Q03111	559 aa	Predicted RBP	7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	MSL1	Q68DK7	614 aa		7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	KRTAP1-3	Q8IUG1	177 aa		7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	LPIN3	Q9BQK8	851 aa		7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	KLK14	Q9P0G3	267 aa		7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	TFIP11	Q9UBB9	837 aa	Known RBP	7.48	□□□□□ -1.21
CCNL1-223	ENST00000481173	GRIK5	Q16478	980 aa		7.47	□□□□□ -1.21
CCNL1-223	ENST00000481173	PERM1	Q5SV97	790 aa		7.47	□□□□□ -1.21
CCNL1-223	ENST00000481173	WFDC12	Q8WWY7	111 aa		7.47	□□□□□ -1.21
CCNL1-223	ENST00000481173	ZFAT	Q9P243	1243 aa		7.47	□□□□□ -1.21
CCNL1-223	ENST00000481173	ZBTB42	B2RXF5	422 aa		7.46	□□□□□ -1.22
CCNL1-223	ENST00000481173	IREB2	P48200	963 aa	Known RBP	7.46	□□□□□ -1.22
CCNL1-223	ENST00000481173	IDH3A	P50213	366 aa		7.46	□□□□□ -1.22
CCNL1-223	ENST00000481173	FLII	Q13045	1269 aa		7.46	□□□□□ -1.22
CCNL1-223	ENST00000481173	MAFB	Q9Y5Q3	323 aa	Predicted RBP	7.46	□□□□□ -1.22
CCNL1-223	ENST00000481173	EPB42	P16452	691 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	TARS	P26639	723 aa	Known RBP	7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	NOS3	P29474	1203 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	INPP5B	P32019	993 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	DPYD	Q12882	1025 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	CRTC2	Q53ET0	693 aa	Predicted RBP	7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	ELMSAN1	Q6PJG2	1045 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	LARP1	Q6PKG0	1096 aa	Known RBP	7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	DHX32	Q7L7V1	743 aa	Known RBP	7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	FBXO11	Q86XK2	927 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	WFDC8	Q8IUA0	241 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	GLMN	Q92990	594 aa		7.45	□□□□□ -1.22
CCNL1-223	ENST00000481173	DGKZ	Q13574	1117 aa		7.44	□□□□□ -1.22
CCNL1-223	ENST00000481173	HFE2	Q6ZVN8	426 aa		7.44	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms