RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 SPEM2Q0P670 501 aa9.71□□□□□ -0.86
PTPN12-211ENST00000481154 PRIMPOLQ96LW4 560 aa9.71□□□□□ -0.86
PTPN12-211ENST00000481154 PRMT3O60678 531 aa9.7□□□□□ -0.86
PTPN12-211ENST00000481154 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
PTPN12-211ENST00000481154 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
PTPN12-211ENST00000481154 QTRT2Q9H974 415 aaKnown RBP9.7□□□□□ -0.86
PTPN12-211ENST00000481154 KCNH4Q9UQ05 1017 aa9.7□□□□□ -0.86
PTPN12-211ENST00000481154 FOXO3O43524 673 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 DGKGP49619 791 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 DGKZQ13574 1117 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 XP32Q5T750 250 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 LINC00114Q6XXX2 140 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 VTI1AQ96AJ9 217 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
PTPN12-211ENST00000481154 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
PTPN12-211ENST00000481154 KCNQ4P56696 695 aa9.68□□□□□ -0.86
PTPN12-211ENST00000481154 FKBP5Q13451 457 aaPredicted RBP9.68□□□□□ -0.86
PTPN12-211ENST00000481154 HIF1AQ16665 826 aa9.68□□□□□ -0.86
PTPN12-211ENST00000481154 TGFBR3LH3BV60 316 aa9.67□□□□□ -0.86
PTPN12-211ENST00000481154 SIN3BO75182 1162 aa9.67□□□□□ -0.86
PTPN12-211ENST00000481154 COL8A1P27658 744 aa9.67□□□□□ -0.86
PTPN12-211ENST00000481154 ELOAQ14241 798 aaKnown RBP9.67□□□□□ -0.86
PTPN12-211ENST00000481154 BHMTQ93088 406 aa9.67□□□□□ -0.86
PTPN12-211ENST00000481154 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
PTPN12-211ENST00000481154 ELOA3CA0A087WX78 387 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-211ENST00000481154 ELOA3DA6NLF2 546 aaPredicted RBP9.66□□□□□ -0.86
PTPN12-211ENST00000481154 ELOA3BQ3SY89 546 aa9.66□□□□□ -0.86
PTPN12-211ENST00000481154 ELOA3Q8NG57 546 aa9.66□□□□□ -0.86
PTPN12-211ENST00000481154 MDFIQ99750 246 aa9.66□□□□□ -0.86
PTPN12-211ENST00000481154 DMGDHQ9UI17 866 aaKnown RBP9.66□□□□□ -0.86
PTPN12-211ENST00000481154 GNB5O14775 395 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 FAM69CQ0P6D2 419 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 SWI5Q1ZZU3 235 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 TMEM164Q5U3C3 297 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 IER5Q5VY09 327 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 SERPINA10Q9UK55 444 aa9.65□□□□□ -0.86
PTPN12-211ENST00000481154 ATG7O95352 703 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
PTPN12-211ENST00000481154 IDH3AP50213 366 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 TBC1D8BQ0IIM8 1120 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 OCLNQ16625 522 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 PBXIP1Q96AQ6 731 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 LRFN2Q9ULH4 789 aa9.64□□□□□ -0.87
PTPN12-211ENST00000481154 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 ALAS2P22557 587 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 ADH7P40394 386 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 TNFRSF25Q93038 417 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 MKNK1Q9BUB5 465 aa9.63□□□□□ -0.87
PTPN12-211ENST00000481154 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
PTPN12-211ENST00000481154 MYO19Q96H55 970 aa9.62□□□□□ -0.87
PTPN12-211ENST00000481154 IGFLR1Q9H665 355 aa9.62□□□□□ -0.87
PTPN12-211ENST00000481154 INPP5BP32019 993 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 C11orf91Q3C1V1 193 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 CAPN12Q6ZSI9 719 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 C8orf86Q6ZUL3 223 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 TRIM11Q96F44 468 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 GSX2Q9BZM3 304 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 USP20Q9Y2K6 914 aa9.61□□□□□ -0.87
PTPN12-211ENST00000481154 MICAL2O94851 1124 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 COX20Q5RI15 118 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 IFT43Q96FT9 208 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 PNMA5Q96PV4 448 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
PTPN12-211ENST00000481154 SAP130Q9H0E3 1048 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 STARD13Q9Y3M8 1113 aa9.6□□□□□ -0.87
PTPN12-211ENST00000481154 M0R082 166 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 ALBP02768 609 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 NFKB1P19838 968 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 CCINQ13939 588 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 KRT25Q7Z3Z0 450 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 ZNF417Q8TAU3 575 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 ZNF587Q96SQ5 575 aaPredicted RBP9.59□□□□□ -0.87
PTPN12-211ENST00000481154 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
PTPN12-211ENST00000481154 PIK3R2O00459 728 aa9.58□□□□□ -0.88
PTPN12-211ENST00000481154 EPB42P16452 691 aa9.58□□□□□ -0.88
PTPN12-211ENST00000481154 ARSDP51689 593 aa9.58□□□□□ -0.88
PTPN12-211ENST00000481154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTPN12-211ENST00000481154 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-211ENST00000481154 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.58□□□□□ -0.88
PTPN12-211ENST00000481154 NAA30Q147X3 362 aaPredicted RBP9.57□□□□□ -0.88
PTPN12-211ENST00000481154 TREML1Q86YW5 311 aa9.57□□□□□ -0.88
PTPN12-211ENST00000481154 PLVAPQ9BX97 442 aa9.57□□□□□ -0.88
PTPN12-211ENST00000481154 BAG6P46379 1132 aa9.56□□□□□ -0.88
PTPN12-211ENST00000481154 C16orf46Q6P387 395 aa9.56□□□□□ -0.88
PTPN12-211ENST00000481154 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
PTPN12-211ENST00000481154 NOP53Q9NZM5 478 aaKnown RBP9.56□□□□□ -0.88
PTPN12-211ENST00000481154 SLC6A14Q9UN76 642 aa9.56□□□□□ -0.88
PTPN12-211ENST00000481154 K7ELQ4 463 aaPredicted RBP9.55□□□□□ -0.88
PTPN12-211ENST00000481154 OPLAHO14841 1288 aa9.55□□□□□ -0.88
PTPN12-211ENST00000481154 TARSP26639 723 aaKnown RBP9.55□□□□□ -0.88
PTPN12-211ENST00000481154 FAM26DQ5JW98 314 aa9.55□□□□□ -0.88
PTPN12-211ENST00000481154 RGL4Q8IZJ4 473 aa9.55□□□□□ -0.88
PTPN12-211ENST00000481154 CLP1Q92989 425 aaKnown RBP9.55□□□□□ -0.88
PTPN12-211ENST00000481154 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
PTPN12-211ENST00000481154 ZFATQ9P243 1243 aa9.55□□□□□ -0.88
PTPN12-211ENST00000481154 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
PTPN12-211ENST00000481154 SASH3O75995 380 aa9.54□□□□□ -0.88
PTPN12-211ENST00000481154 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms