RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 EPB42P16452 691 aa9.8□□□□□ -0.84
CALD1-219ENST00000480638 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
CALD1-219ENST00000480638 SERPINB4P48594 390 aa9.8□□□□□ -0.84
CALD1-219ENST00000480638 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
CALD1-219ENST00000480638 OPLAHO14841 1288 aa9.79□□□□□ -0.84
CALD1-219ENST00000480638 INSM1Q01101 510 aaPredicted RBP9.79□□□□□ -0.84
CALD1-219ENST00000480638 ZNF211Q13398 564 aaPredicted RBP9.79□□□□□ -0.84
CALD1-219ENST00000480638 SLC30A3Q99726 388 aa9.79□□□□□ -0.84
CALD1-219ENST00000480638 ZBTB39O15060 712 aa9.78□□□□□ -0.84
CALD1-219ENST00000480638 MPSTP25325 297 aa9.78□□□□□ -0.84
CALD1-219ENST00000480638 SPEM2Q0P670 501 aa9.78□□□□□ -0.84
CALD1-219ENST00000480638 ACDQ96AP0 544 aa9.78□□□□□ -0.84
CALD1-219ENST00000480638 EGFL7Q9UHF1 273 aa9.78□□□□□ -0.84
CALD1-219ENST00000480638 ARAFP10398 606 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 ZAP70P43403 619 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
CALD1-219ENST00000480638 ZNF468Q5VIY5 522 aaPredicted RBP9.77□□□□□ -0.85
CALD1-219ENST00000480638 RGL4Q8IZJ4 473 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 ZSCAN1Q8NBB4 408 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 OXCT2Q9BYC2 517 aaPredicted RBP9.77□□□□□ -0.85
CALD1-219ENST00000480638 ANO2Q9NQ90 1003 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 USP20Q9Y2K6 914 aa9.77□□□□□ -0.85
CALD1-219ENST00000480638 NPR3P17342 541 aa9.76□□□□□ -0.85
CALD1-219ENST00000480638 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
CALD1-219ENST00000480638 LYPD4Q6UWN0 246 aa9.76□□□□□ -0.85
CALD1-219ENST00000480638 RAB44Q7Z6P3 723 aaPredicted RBP9.76□□□□□ -0.85
CALD1-219ENST00000480638 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
CALD1-219ENST00000480638 WHAMMQ8TF30 809 aa9.76□□□□□ -0.85
CALD1-219ENST00000480638 AVENQ9NQS1 362 aaPredicted RBP9.76□□□□□ -0.85
CALD1-219ENST00000480638 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
CALD1-219ENST00000480638 RTCBQ9Y3I0 505 aaKnown RBP9.76□□□□□ -0.85
CALD1-219ENST00000480638 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
CALD1-219ENST00000480638 GDF2Q9UK05 429 aaPredicted RBP9.75□□□□□ -0.85
CALD1-219ENST00000480638 H3BRB1 525 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 PDIA4P13667 645 aaKnown RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 EIF1AXP47813 144 aaKnown RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 NOM1Q5C9Z4 860 aaKnown RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 SYT9Q86SS6 491 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 ATCAYQ86WG3 371 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 SVOPQ8N4V2 548 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 GSX2Q9BZM3 304 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 FAM13BQ9NYF5 915 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 KLF15Q9UIH9 416 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 GGA1Q9UJY5 639 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 GNEQ9Y223 722 aaKnown RBP9.74□□□□□ -0.85
CALD1-219ENST00000480638 KCNMB2Q9Y691 235 aa9.74□□□□□ -0.85
CALD1-219ENST00000480638 ICMTO60725 284 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 FAM13AO94988 1023 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 ADH6P28332 368 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 PCBP4P57723 403 aaKnown RBP9.73□□□□□ -0.85
CALD1-219ENST00000480638 KCNA1Q09470 495 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 CCINQ13939 588 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 SLCO4C1Q6ZQN7 724 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
CALD1-219ENST00000480638 BHMTQ93088 406 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 C11orf16Q9NQ32 467 aa9.73□□□□□ -0.85
CALD1-219ENST00000480638 NEURL1BA8MQ27 555 aa9.72□□□□□ -0.85
CALD1-219ENST00000480638 BCRP11274 1271 aa9.72□□□□□ -0.85
CALD1-219ENST00000480638 NEUROD1Q13562 356 aa9.72□□□□□ -0.85
CALD1-219ENST00000480638 TRIP4Q15650 581 aaPredicted RBP9.72□□□□□ -0.85
CALD1-219ENST00000480638 GPR152Q8TDT2 470 aa9.72□□□□□ -0.85
CALD1-219ENST00000480638 EGFRP00533 1210 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 C1orf229Q6ZS94 237 aaPredicted RBP9.71□□□□□ -0.86
CALD1-219ENST00000480638 FCHSD1Q86WN1 690 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 PIK3R5Q8WYR1 880 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 PNMA5Q96PV4 448 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 EFCC1Q9HA90 598 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 LRRC4BQ9NT99 713 aa9.71□□□□□ -0.86
CALD1-219ENST00000480638 OIP5O43482 229 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 SIN3BO75182 1162 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 XYLBO75191 536 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 NFKB1P19838 968 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 MAP3K10Q02779 954 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 KRT25Q7Z3Z0 450 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.7□□□□□ -0.86
CALD1-219ENST00000480638 IVNS1ABPQ9Y6Y0 642 aa9.7□□□□□ -0.86
CALD1-219ENST00000480638 ECM1Q16610 540 aa9.69□□□□□ -0.86
CALD1-219ENST00000480638 EDEM1Q92611 657 aa9.69□□□□□ -0.86
CALD1-219ENST00000480638 NUDT16Q96DE0 195 aaKnown RBP9.69□□□□□ -0.86
CALD1-219ENST00000480638 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 SHISA8B8ZZ34 492 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 ARHGEF15O94989 841 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 EPXP11678 715 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
CALD1-219ENST00000480638 GALNT6Q8NCL4 622 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 MDFIQ99750 246 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 ZFATQ9P243 1243 aa9.68□□□□□ -0.86
CALD1-219ENST00000480638 UBAP1LF5GYI3 381 aa9.67□□□□□ -0.86
CALD1-219ENST00000480638 FZD6O60353 706 aa9.67□□□□□ -0.86
CALD1-219ENST00000480638 SASH3O75995 380 aa9.67□□□□□ -0.86
CALD1-219ENST00000480638 PDGFAP04085 211 aa9.67□□□□□ -0.86
CALD1-219ENST00000480638 MZF1P28698 734 aaPredicted RBP9.67□□□□□ -0.86
CALD1-219ENST00000480638 EDARADDQ8WWZ3 215 aa9.67□□□□□ -0.86
CALD1-219ENST00000480638 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms