RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DBF4Q9UBU7 674 aaPredicted RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 RAB3IL1Q8TBN0 382 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
VEGFA-212ENST00000480614 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 PIK3R4Q99570 1358 aa10.93□□□□□ -0.66
VEGFA-212ENST00000480614 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-212ENST00000480614 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 JAKMIP2Q96AA8 810 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 HSF2BPO75031 334 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 MAATS1Q7Z4T9 603 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 RBM27Q9P2N5 1060 aaKnown RBP10.92□□□□□ -0.66
VEGFA-212ENST00000480614 ARAP1Q96P48 1450 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 NUTM1Q86Y26 1132 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 LMAN1P49257 510 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 HSPA4P34932 840 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 SNW1Q13573 536 aaKnown RBP10.92□□□□□ -0.66
VEGFA-212ENST00000480614 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 IVLP07476 585 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 ZFYP08048 801 aaPredicted RBP10.92□□□□□ -0.66
VEGFA-212ENST00000480614 GNAQP50148 359 aa10.92□□□□□ -0.66
VEGFA-212ENST00000480614 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 DNAAF4Q8WXU2 420 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 KRT23Q9C075 422 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 KIAA1524Q8TCG1 905 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 MSANTD4Q8NCY6 345 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 BOLA2Q9H3K6 86 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 UBE2HP62256 183 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 NBPF7P0C2Y1 421 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 CEP128Q6ZU80 1094 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 PRIMPOLQ96LW4 560 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 PRC1O43663 620 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 KIAA0753Q2KHM9 967 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 CCDC14Q49A88 953 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 LMBR1Q8WVP7 490 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 KAT14Q9H8E8 782 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 PCF11O94913 1555 aaKnown RBP10.91□□□□□ -0.66
VEGFA-212ENST00000480614 TMEM67Q5HYA8 995 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 BICD1Q96G01 975 aa10.91□□□□□ -0.66
VEGFA-212ENST00000480614 MYO1BO43795 1136 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 TMC6Q7Z403 805 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 ANAPC4Q9UJX5 808 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 FBF1Q8TES7 1133 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 CWC25Q9NXE8 425 aaPredicted RBP10.9□□□□□ -0.66
VEGFA-212ENST00000480614 KRT13P13646 458 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 CYLC1P35663 651 aaPredicted RBP10.9□□□□□ -0.66
VEGFA-212ENST00000480614 BICDL1Q6ZP65 573 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 CNNM2Q9H8M5 875 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 HMGB1P1B2RPK0 211 aaPredicted RBP10.9□□□□□ -0.66
VEGFA-212ENST00000480614 AKR1B10O60218 316 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 RRS1Q15050 365 aaKnown RBP10.9□□□□□ -0.66
VEGFA-212ENST00000480614 DAAM2Q86T65 1068 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 MPNDQ8N594 471 aa10.9□□□□□ -0.66
VEGFA-212ENST00000480614 BMS1Q14692 1282 aaKnown RBP10.9□□□□□ -0.67
VEGFA-212ENST00000480614 SRRTQ9BXP5 876 aaKnown RBP10.9□□□□□ -0.67
VEGFA-212ENST00000480614 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.67
VEGFA-212ENST00000480614 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.67
VEGFA-212ENST00000480614 TNNT1P13805 278 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 FERMT3Q86UX7 667 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 SLU7O95391 586 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TUBBP07437 444 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 NCOA7Q8NI08 942 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 MYD88Q99836 296 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TMCO5BA8MYB1 307 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 IARSP41252 1262 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 WDR78Q5VTH9 848 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TMTC2Q8N394 836 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 MRPS9P82933 396 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 PUF60Q9UHX1 559 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 SAMM50Q9Y512 469 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 CEP83Q9Y592 693 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 KCNG4Q8TDN1 519 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 STX6O43752 255 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 NCBP1Q09161 790 aaKnown RBP10.89□□□□□ -0.67
VEGFA-212ENST00000480614 TIGD1Q96MW7 591 aa10.89□□□□□ -0.67
VEGFA-212ENST00000480614 NCOA1Q15788 1441 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 TRMT112Q9UI30 125 aaKnown RBP10.88□□□□□ -0.67
VEGFA-212ENST00000480614 OPA1O60313 960 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 METAP2P50579 478 aaKnown RBP eCLIP10.88□□□□□ -0.67
VEGFA-212ENST00000480614 DDX46Q7L014 1031 aaKnown RBP10.88□□□□□ -0.67
VEGFA-212ENST00000480614 PPP1R42Q7Z4L9 355 aa10.88□□□□□ -0.67
VEGFA-212ENST00000480614 C16orf45Q96MC5 204 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-212ENST00000480614 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-212ENST00000480614 N4BP3O15049 544 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms