RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 ARFGEF2Q9Y6D5 1785 aa23■■□□□ 1.27
TNFRSF8-204ENST00000479933 WDR33Q9C0J8 1336 aaKnown RBP23■■□□□ 1.27
TNFRSF8-204ENST00000479933 MBD3O95983 291 aa22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 NCLP19338 710 aaKnown RBP22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 TM6SF1Q9BZW5 370 aa22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 LIMCH1Q9UPQ0 1083 aa22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 USP16Q9Y5T5 823 aa22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 MSNP26038 577 aaKnown RBP22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 COPRSQ9NQ92 184 aa22.99■■□□□ 1.27
TNFRSF8-204ENST00000479933 ZNF500O60304 480 aaPredicted RBP22.98■■□□□ 1.27
TNFRSF8-204ENST00000479933 FGD1P98174 961 aa22.98■■□□□ 1.27
TNFRSF8-204ENST00000479933 CAVIN1Q6NZI2 390 aaKnown RBP22.97■■□□□ 1.27
TNFRSF8-204ENST00000479933 RASEFQ8IZ41 740 aa22.97■■□□□ 1.27
TNFRSF8-204ENST00000479933 SNRKQ9NRH2 765 aa22.97■■□□□ 1.27
TNFRSF8-204ENST00000479933 ZSCAN23Q3MJ62 389 aa22.97■■□□□ 1.27
TNFRSF8-204ENST00000479933 XIRP1Q702N8 1843 aaKnown RBP22.97■■□□□ 1.27
TNFRSF8-204ENST00000479933 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 ANP32BQ92688 251 aaKnown RBP22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 PCDH11XQ9BZA7 1347 aa22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 PCDH11YQ9BZA8 1340 aa22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 DYNC1I1O14576 645 aa22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 CCDC8Q9H0W5 538 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 CCDC171Q6TFL3 1326 aa22.96■■□□□ 1.27
TNFRSF8-204ENST00000479933 GLI3P10071 1580 aa22.95■■□□□ 1.27
TNFRSF8-204ENST00000479933 ZKSCAN1P17029 563 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 NASPP49321 788 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 AK2P54819 239 aa22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 RABL6Q3YEC7 729 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 VPS53Q5VIR6 699 aa22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 SIL1Q9H173 461 aa22.95■■□□□ 1.26
TNFRSF8-204ENST00000479933 GPT2Q8TD30 523 aa22.94■■□□□ 1.26
TNFRSF8-204ENST00000479933 ZSCAN31Q96LW9 406 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF8-204ENST00000479933 CASTP20810 708 aaKnown RBP22.94■■□□□ 1.26
TNFRSF8-204ENST00000479933 PTH1RQ03431 593 aa22.94■■□□□ 1.26
TNFRSF8-204ENST00000479933 CYP46A1Q9Y6A2 500 aa22.94■■□□□ 1.26
TNFRSF8-204ENST00000479933 EPHA10Q5JZY3 1008 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 ZSWIM6Q9HCJ5 1215 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 UBR2Q8IWV8 1755 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 ERVV-2B6SEH9 535 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 NECTIN1Q15223 517 aa22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 PRPF40BQ6NWY9 871 aaKnown RBP22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 ZCRB1Q8TBF4 217 aaKnown RBP22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 SH2B1Q9NRF2 756 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF8-204ENST00000479933 RUFY3Q7L099 469 aa22.92■■□□□ 1.26
TNFRSF8-204ENST00000479933 RFX5P48382 616 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 NMIQ13287 307 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 FOXD4L5Q5VV16 416 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 FOXD4L4Q8WXT5 416 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 MAP4K1Q92918 833 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 JAKMIP1Q96N16 626 aaKnown RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 FSD1Q9BTV5 496 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 PRDM11Q9NQV5 511 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 PDRG1Q9NUG6 133 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 UBE3BQ7Z3V4 1068 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 TLR7Q9NYK1 1049 aaKnown RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 NOL7Q9UMY1 257 aaKnown RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 RFX7Q2KHR2 1363 aa22.91■■□□□ 1.26
TNFRSF8-204ENST00000479933 ATP5JP18859 108 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 PSMA5P28066 241 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 CSPP1Q1MSJ5 1256 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 RNF20Q5VTR2 975 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 FAM13BQ9NYF5 915 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 RBM8AQ9Y5S9 174 aaKnown RBP22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 A0A087WZG4 1122 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 MCM5P33992 734 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 KCNJ4P48050 445 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 PTPN12Q05209 780 aaKnown RBP22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 TOM1L2Q6ZVM7 507 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 SYAP1Q96A49 352 aaPredicted RBP22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 BOLA2Q9H3K6 86 aa22.9■■□□□ 1.26
TNFRSF8-204ENST00000479933 A0A0U1RQG5 324 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF8-204ENST00000479933 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF8-204ENST00000479933 KLHDC4Q8TBB5 520 aa22.89■■□□□ 1.25
TNFRSF8-204ENST00000479933 SMC3Q9UQE7 1217 aa22.89■■□□□ 1.25
TNFRSF8-204ENST00000479933 SOS2Q07890 1332 aaPredicted RBP22.89■■□□□ 1.25
TNFRSF8-204ENST00000479933 PAPPAQ13219 1627 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 TNNI3KQ59H18 835 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 CREB3L3Q68CJ9 461 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 FAM227BQ96M60 508 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 FPGT-TNNI3KV9GXZ4 949 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 RPAP1Q9BWH6 1393 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 CASP7P55210 303 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 DMTNQ08495 405 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 ATP6V1DQ9Y5K8 247 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 MED23Q9ULK4 1368 aa22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF8-204ENST00000479933 NUP188Q5SRE5 1749 aa22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 PDIA4P13667 645 aaKnown RBP22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 JCADQ9P266 1359 aa22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 UQCRHLA0A096LP55 91 aa22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 UQCRHP07919 91 aa22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 HMG20BQ9P0W2 317 aa22.87■■□□□ 1.25
TNFRSF8-204ENST00000479933 ATP5J2-PTCD1G3V325 749 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 269.8 ms