RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 LNPKQ9C0E8 428 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 EXOC6BQ9Y2D4 811 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 ARHGEF1Q92888 912 aaKnown RBP13.95□□□□□ -0.18
APTX-223ENST00000479656 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 BCL11AQ9H165 835 aa13.95□□□□□ -0.18
APTX-223ENST00000479656 TAF1LQ8IZX4 1826 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 PHF14O94880 888 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 PCCAP05165 728 aaPredicted RBP13.94□□□□□ -0.18
APTX-223ENST00000479656 PDE4AP27815 886 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 SYNE4Q8N205 404 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 ZBTB38Q8NAP3 1195 aaPredicted RBP13.94□□□□□ -0.18
APTX-223ENST00000479656 NUP98P52948 1817 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 UBN2Q6ZU65 1347 aa13.94□□□□□ -0.18
APTX-223ENST00000479656 SURF6O75683 361 aaKnown RBP13.93□□□□□ -0.18
APTX-223ENST00000479656 FOXO4P98177 505 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
APTX-223ENST00000479656 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 FAM177BA6PVY3 158 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
APTX-223ENST00000479656 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 TRMT112Q9UI30 125 aaKnown RBP13.93□□□□□ -0.18
APTX-223ENST00000479656 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
APTX-223ENST00000479656 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
APTX-223ENST00000479656 ZPR1O75312 459 aa13.92□□□□□ -0.18
APTX-223ENST00000479656 RABL6Q3YEC7 729 aaPredicted RBP13.92□□□□□ -0.18
APTX-223ENST00000479656 LMBR1LQ6UX01 489 aa13.92□□□□□ -0.18
APTX-223ENST00000479656 BCL2L12Q9HB09 334 aa13.92□□□□□ -0.18
APTX-223ENST00000479656 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
APTX-223ENST00000479656 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
APTX-223ENST00000479656 RFC4P35249 363 aa13.91□□□□□ -0.18
APTX-223ENST00000479656 C16orf71Q8IYS4 520 aaPredicted RBP13.91□□□□□ -0.18
APTX-223ENST00000479656 BICDL1Q6ZP65 573 aa13.91□□□□□ -0.18
APTX-223ENST00000479656 ANKRD36CQ5JPF3 1778 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.18
APTX-223ENST00000479656 PARP10Q53GL7 1025 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 TBC1D9BQ66K14 1250 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 KLHDC4Q8TBB5 520 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 UTP14AQ9BVJ6 771 aaKnown RBP13.9□□□□□ -0.18
APTX-223ENST00000479656 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
APTX-223ENST00000479656 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
APTX-223ENST00000479656 IRS4O14654 1257 aaPredicted RBP13.89□□□□□ -0.19
APTX-223ENST00000479656 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
APTX-223ENST00000479656 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
APTX-223ENST00000479656 CDHR2Q9BYE9 1310 aa13.89□□□□□ -0.19
APTX-223ENST00000479656 RFX5P48382 616 aaPredicted RBP13.89□□□□□ -0.19
APTX-223ENST00000479656 HSP90AB4PQ58FF6 505 aa13.89□□□□□ -0.19
APTX-223ENST00000479656 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
APTX-223ENST00000479656 RGL2O15211 777 aa13.88□□□□□ -0.19
APTX-223ENST00000479656 ADRA2BP18089 450 aa13.88□□□□□ -0.19
APTX-223ENST00000479656 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
APTX-223ENST00000479656 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
APTX-223ENST00000479656 OS9Q13438 667 aaPredicted RBP13.88□□□□□ -0.19
APTX-223ENST00000479656 RHPN1Q8TCX5 695 aa13.88□□□□□ -0.19
APTX-223ENST00000479656 SIL1Q9H173 461 aa13.88□□□□□ -0.19
APTX-223ENST00000479656 USP42Q9H9J4 1324 aaKnown RBP13.88□□□□□ -0.19
APTX-223ENST00000479656 NTSR2O95665 410 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 CSF1RP07333 972 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 SSFA2P28290 1259 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
APTX-223ENST00000479656 EZH2Q15910 746 aaKnown RBP13.87□□□□□ -0.19
APTX-223ENST00000479656 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 BCORQ6W2J9 1755 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 OTUD7AQ8TE49 926 aaPredicted RBP13.87□□□□□ -0.19
APTX-223ENST00000479656 SH3TC1Q8TE82 1336 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 CCDC85AQ96PX6 553 aaPredicted RBP13.87□□□□□ -0.19
APTX-223ENST00000479656 IL1RAPL2Q9NP60 686 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 TNS1Q9HBL0 1735 aaKnown RBP13.87□□□□□ -0.19
APTX-223ENST00000479656 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
APTX-223ENST00000479656 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 KIF1BPQ96EK5 621 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 SETDB2Q96T68 719 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 COPRSQ9NQ92 184 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
APTX-223ENST00000479656 PDE8AO60658 829 aa13.86□□□□□ -0.19
APTX-223ENST00000479656 PLEKHM2Q8IWE5 1019 aa13.86□□□□□ -0.19
APTX-223ENST00000479656 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
APTX-223ENST00000479656 CAMKK2Q96RR4 588 aa13.86□□□□□ -0.19
APTX-223ENST00000479656 SASH1O94885 1247 aa13.85□□□□□ -0.19
APTX-223ENST00000479656 ZNF594Q96JF6 807 aaPredicted RBP13.85□□□□□ -0.19
APTX-223ENST00000479656 UBR3Q6ZT12 1888 aa13.85□□□□□ -0.19
APTX-223ENST00000479656 CTSWP56202 376 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 SF3B2Q13435 895 aaKnown RBP13.84□□□□□ -0.19
APTX-223ENST00000479656 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 GYS1P13807 737 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
APTX-223ENST00000479656 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 ERFEQ4G0M1 354 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 GREM2Q9H772 168 aa13.84□□□□□ -0.19
APTX-223ENST00000479656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.84□□□□□ -0.19
APTX-223ENST00000479656 C4AP0C0L4 1744 aa13.83□□□□□ -0.2
APTX-223ENST00000479656 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms