RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 RNF20Q5VTR2 975 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 IGKV5-2P06315 115 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 GJB2P29033 226 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 ADCK5Q3MIX3 580 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 RIC3Q7Z5B4 369 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 SLC52A2Q9HAB3 445 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 MTMR6Q9Y217 621 aa29.46■■■□□ 2.31
SYNGAP1-206ENST00000479510 COL15A1P39059 1388 aa29.45■■■□□ 2.31
SYNGAP1-206ENST00000479510 RRP9O43818 475 aaKnown RBP29.45■■■□□ 2.31
SYNGAP1-206ENST00000479510 ANKRD1Q15327 319 aa29.45■■■□□ 2.31
SYNGAP1-206ENST00000479510 RNF214Q8ND24 703 aa29.45■■■□□ 2.31
SYNGAP1-206ENST00000479510 SCN11AQ9UI33 1791 aa29.45■■■□□ 2.3
SYNGAP1-206ENST00000479510 JCADQ9P266 1359 aa29.45■■■□□ 2.3
SYNGAP1-206ENST00000479510 LARGE1O95461 756 aa29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 NMIQ13287 307 aaPredicted RBP29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 CCDC83Q8IWF9 413 aa29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 FOXD4L6Q3SYB3 417 aaPredicted RBP29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 FOXD4L3Q6VB84 417 aaPredicted RBP29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 RAPGEF4Q8WZA2 1011 aa29.44■■■□□ 2.3
SYNGAP1-206ENST00000479510 NPHP3Q7Z494 1330 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 NEURL1BA8MQ27 555 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 METTL22Q9BUU2 404 aaPredicted RBP29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 HMG20BQ9P0W2 317 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 MED23Q9ULK4 1368 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 CPA1P15085 419 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 GCKRQ14397 625 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 TSGA10IPQ3SY00 556 aa29.43■■■□□ 2.3
SYNGAP1-206ENST00000479510 TCHHQ07283 1943 aa29.42■■■□□ 2.3
SYNGAP1-206ENST00000479510 KCNJ4P48050 445 aa29.42■■■□□ 2.3
SYNGAP1-206ENST00000479510 XPCQ01831 940 aaPredicted RBP29.42■■■□□ 2.3
SYNGAP1-206ENST00000479510 RFX7Q2KHR2 1363 aa29.42■■■□□ 2.3
SYNGAP1-206ENST00000479510 C1orf167Q5SNV9 1468 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 SLC27A2O14975 620 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 LMOD2Q6P5Q4 547 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 COPRSQ9NQ92 184 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 KDM6AO15550 1401 aaPredicted RBP29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 PDCP20941 246 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 AIMP1Q12904 312 aaKnown RBP29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 ALS2Q96Q42 1657 aa29.41■■■□□ 2.3
SYNGAP1-206ENST00000479510 ME3Q16798 604 aa29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 FAM227BQ96M60 508 aa29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 C5P01031 1676 aa29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 ADAMTSL3P82987 1691 aa29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 FSD1Q9BTV5 496 aa29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 CCDC8Q9H0W5 538 aaPredicted RBP29.4■■■□□ 2.3
SYNGAP1-206ENST00000479510 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
SYNGAP1-206ENST00000479510 LARP6Q9BRS8 491 aaKnown RBP29.39■■■□□ 2.3
SYNGAP1-206ENST00000479510 PHKG2P15735 406 aa29.38■■■□□ 2.29
SYNGAP1-206ENST00000479510 ST3GAL1Q11201 340 aa29.38■■■□□ 2.29
SYNGAP1-206ENST00000479510 BLOC1S2Q6QNY1 142 aa29.37■■■□□ 2.29
SYNGAP1-206ENST00000479510 XAGE3Q8WTP9 111 aa29.37■■■□□ 2.29
SYNGAP1-206ENST00000479510 RGPD5Q99666 1765 aa29.37■■■□□ 2.29
SYNGAP1-206ENST00000479510 FIBPO43427 364 aa29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 ATP5JP18859 108 aa29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 TPCN1Q9ULQ1 816 aa29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 A0A0D9SFI3 127 aa29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 KRT32Q14532 448 aa29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.36■■■□□ 2.29
SYNGAP1-206ENST00000479510 SNRPA1P09661 255 aaKnown RBP29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 IFNL2Q8IZJ0 200 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 BOLA2Q9H3K6 86 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 TLR7Q9NYK1 1049 aaKnown RBP29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 PTMAP06454 111 aaKnown RBP29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 RPS6KB1P23443 525 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 USPL1Q5W0Q7 1092 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 ANKRD13DQ6ZTN6 518 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 COPS6Q7L5N1 327 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 C19orf44Q9H6X5 657 aa29.35■■■□□ 2.29
SYNGAP1-206ENST00000479510 ELP1O95163 1332 aa29.34■■■□□ 2.29
SYNGAP1-206ENST00000479510 HSP90AA2PQ14568 343 aaPredicted RBP29.34■■■□□ 2.29
SYNGAP1-206ENST00000479510 RABL6Q3YEC7 729 aaPredicted RBP29.34■■■□□ 2.29
SYNGAP1-206ENST00000479510 MYD88Q99836 296 aa29.34■■■□□ 2.29
SYNGAP1-206ENST00000479510 DNM1Q05193 864 aaKnown RBP29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 LRP10Q7Z4F1 713 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 TICAM2Q86XR7 235 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 FUCA2Q9BTY2 467 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 SLC39A6Q13433 755 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 LARP1BQ659C4 914 aaKnown RBP29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 DCAF5Q96JK2 942 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 SIL1Q9H173 461 aa29.33■■■□□ 2.29
SYNGAP1-206ENST00000479510 PROSER2Q86WR7 435 aaPredicted RBP29.32■■■□□ 2.28
SYNGAP1-206ENST00000479510 NLRP2Q9NX02 1062 aa29.32■■■□□ 2.28
SYNGAP1-206ENST00000479510 RFX5P48382 616 aaPredicted RBP29.32■■■□□ 2.28
SYNGAP1-206ENST00000479510 KRT85P78386 507 aa29.32■■■□□ 2.28
SYNGAP1-206ENST00000479510 NFATC2IPQ8NCF5 419 aa29.32■■■□□ 2.28
SYNGAP1-206ENST00000479510 ZNF496Q96IT1 587 aaPredicted RBP29.31■■■□□ 2.28
SYNGAP1-206ENST00000479510 VPS37CA5D8V6 355 aaPredicted RBP29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 TAF5LO75529 589 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 MYL6BP14649 208 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 EPHA10Q5JZY3 1008 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 UBE2Q2Q8WVN8 375 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 KIAA2012Q0VF49 1180 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 NECAB1Q8N987 351 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 FMNL2Q96PY5 1086 aa29.3■■■□□ 2.28
SYNGAP1-206ENST00000479510 MEGF6O75095 1541 aa29.29■■■□□ 2.28
SYNGAP1-206ENST00000479510 TNNI3KQ59H18 835 aa29.29■■■□□ 2.28
SYNGAP1-206ENST00000479510 TTC5Q8N0Z6 440 aa29.29■■■□□ 2.28
SYNGAP1-206ENST00000479510 FPGT-TNNI3KV9GXZ4 949 aa29.29■■■□□ 2.28
SYNGAP1-206ENST00000479510 ZC3H6P61129 1189 aaKnown RBP29.29■■■□□ 2.28
SYNGAP1-206ENST00000479510 COL18A1P39060 1754 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms