RNA–Protein interactions for RNA: ENST00000479317.1

RRP12-206, Transcript of ribosomal RNA processing 12 homolog, humanhuman

TSL 3

Gene RRP12, Length 411 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP12-206ENST00000479317 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
RRP12-206ENST00000479317 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
RRP12-206ENST00000479317 GPBP1L1Q9HC44 474 aaPredicted RBP13.06□□□□□ -0.32
RRP12-206ENST00000479317 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
RRP12-206ENST00000479317 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 LMNB1P20700 586 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 RASSF7Q02833 373 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 CRY2Q49AN0 593 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
RRP12-206ENST00000479317 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
RRP12-206ENST00000479317 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
RRP12-206ENST00000479317 RNF123Q5XPI4 1314 aa13.05□□□□□ -0.32
RRP12-206ENST00000479317 CHD4Q14839 1912 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 NFKBIEO00221 500 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 VAMP4O75379 141 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
RRP12-206ENST00000479317 TRIM28Q13263 835 aaKnown RBP13.04□□□□□ -0.32
RRP12-206ENST00000479317 SYNE4Q8N205 404 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 C7orf43Q8WVR3 580 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 SH3TC1Q8TE82 1336 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 ADCY9O60503 1353 aa13.04□□□□□ -0.32
RRP12-206ENST00000479317 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
RRP12-206ENST00000479317 C3orf67Q6ZVT6 689 aa13.03□□□□□ -0.32
RRP12-206ENST00000479317 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
RRP12-206ENST00000479317 MYD88Q99836 296 aa13.03□□□□□ -0.32
RRP12-206ENST00000479317 PRELPP51888 382 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 CCDC93Q567U6 631 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 KSR2Q6VAB6 950 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.33
RRP12-206ENST00000479317 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 ZNF521Q96K83 1311 aa13.02□□□□□ -0.33
RRP12-206ENST00000479317 PI4KAP2A4QPH2 592 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
RRP12-206ENST00000479317 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 G2E3Q7L622 706 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 RTKN2Q8IZC4 609 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 PI4KAP1Q8N8J0 262 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
RRP12-206ENST00000479317 BRCA1P38398 1863 aaKnown RBP13□□□□□ -0.33
RRP12-206ENST00000479317 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
RRP12-206ENST00000479317 RIC1Q4ADV7 1423 aa13□□□□□ -0.33
RRP12-206ENST00000479317 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
RRP12-206ENST00000479317 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
RRP12-206ENST00000479317 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
RRP12-206ENST00000479317 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
RRP12-206ENST00000479317 MIER1Q8N108 512 aa13□□□□□ -0.33
RRP12-206ENST00000479317 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
RRP12-206ENST00000479317 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
RRP12-206ENST00000479317 CWC25Q9NXE8 425 aaPredicted RBP13□□□□□ -0.33
RRP12-206ENST00000479317 NUP98P52948 1817 aa12.99□□□□□ -0.33
RRP12-206ENST00000479317 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
RRP12-206ENST00000479317 E9PSI1 815 aa12.99□□□□□ -0.33
RRP12-206ENST00000479317 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
RRP12-206ENST00000479317 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
RRP12-206ENST00000479317 FLIIQ13045 1269 aa12.99□□□□□ -0.33
RRP12-206ENST00000479317 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
RRP12-206ENST00000479317 KDM2BQ8NHM5 1336 aa12.98□□□□□ -0.33
RRP12-206ENST00000479317 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
RRP12-206ENST00000479317 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
RRP12-206ENST00000479317 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
RRP12-206ENST00000479317 BBOX1O75936 387 aa12.98□□□□□ -0.33
RRP12-206ENST00000479317 C1QTNF8P60827 252 aa12.98□□□□□ -0.33
RRP12-206ENST00000479317 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
RRP12-206ENST00000479317 ABCC4O15439 1325 aa12.97□□□□□ -0.33
RRP12-206ENST00000479317 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
RRP12-206ENST00000479317 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
RRP12-206ENST00000479317 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
RRP12-206ENST00000479317 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
RRP12-206ENST00000479317 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
RRP12-206ENST00000479317 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
RRP12-206ENST00000479317 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
RRP12-206ENST00000479317 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
RRP12-206ENST00000479317 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
RRP12-206ENST00000479317 GLTPD2A6NH11 291 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 KIF3CO14782 793 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 GRAPQ13588 217 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.33
RRP12-206ENST00000479317 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 NMRK2Q9NPI5 230 aa12.96□□□□□ -0.33
RRP12-206ENST00000479317 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
RRP12-206ENST00000479317 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
RRP12-206ENST00000479317 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
RRP12-206ENST00000479317 CWF19L2Q2TBE0 894 aaKnown RBP12.95□□□□□ -0.34
RRP12-206ENST00000479317 SP8Q8IXZ3 490 aa12.95□□□□□ -0.34
RRP12-206ENST00000479317 PSMD1Q99460 953 aa12.95□□□□□ -0.34
RRP12-206ENST00000479317 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
RRP12-206ENST00000479317 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
RRP12-206ENST00000479317 PDE8AO60658 829 aa12.94□□□□□ -0.34
RRP12-206ENST00000479317 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
RRP12-206ENST00000479317 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
RRP12-206ENST00000479317 C16orf71Q8IYS4 520 aaPredicted RBP12.94□□□□□ -0.34
RRP12-206ENST00000479317 F6X3S4 739 aa12.93□□□□□ -0.34
RRP12-206ENST00000479317 GCKRQ14397 625 aa12.93□□□□□ -0.34
RRP12-206ENST00000479317 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
RRP12-206ENST00000479317 SLC51AQ86UW1 340 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms