RNA–Protein interactions for RNA: ENST00000479295.1

PTPN18-210, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-210	ENST00000479295	ERFE	Q4G0M1	354 aa		12.53	□□□□□ -0.4
PTPN18-210	ENST00000479295	PELP1	Q8IZL8	1130 aa	Known RBP	12.53	□□□□□ -0.4
PTPN18-210	ENST00000479295	NPR1	P16066	1061 aa		12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	NUTM1	Q86Y26	1132 aa		12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	C7orf43	Q8WVR3	580 aa		12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	CNKSR1	Q969H4	720 aa		12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	UTP14A	Q9BVJ6	771 aa	Known RBP	12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	SNED1	Q8TER0	1413 aa		12.52	□□□□□ -0.41
PTPN18-210	ENST00000479295	KSR2	Q6VAB6	950 aa		12.51	□□□□□ -0.41
PTPN18-210	ENST00000479295	G2E3	Q7L622	706 aa		12.51	□□□□□ -0.41
PTPN18-210	ENST00000479295	METTL22	Q9BUU2	404 aa	Predicted RBP	12.51	□□□□□ -0.41
PTPN18-210	ENST00000479295	STK31	Q9BXU1	1019 aa		12.51	□□□□□ -0.41
PTPN18-210	ENST00000479295	DDX58	O95786	925 aa	Known RBP	12.5	□□□□□ -0.41
PTPN18-210	ENST00000479295	SLC4A2	P04920	1241 aa		12.5	□□□□□ -0.41
PTPN18-210	ENST00000479295	RIC3	Q7Z5B4	369 aa		12.5	□□□□□ -0.41
PTPN18-210	ENST00000479295	WWC3	Q9ULE0	1092 aa		12.5	□□□□□ -0.41
PTPN18-210	ENST00000479295	SLX4	Q8IY92	1834 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	SH3TC1	Q8TE82	1336 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	LTBP3	Q9NS15	1303 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	PI4KAP2	A4QPH2	592 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	FAM177B	A6PVY3	158 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	ALDH1B1	P30837	517 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	FLII	Q13045	1269 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	PRPF40B	Q6NWY9	871 aa	Known RBP	12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	C3orf67	Q6ZVT6	689 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	PI4KAP1	Q8N8J0	262 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	CCDC191	Q8NCU4	936 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	ZNF428	Q96B54	188 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	CRAMP1	Q96RY5	1269 aa		12.49	□□□□□ -0.41
PTPN18-210	ENST00000479295	FER1L6	Q2WGJ9	1857 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	NFKBIE	O00221	500 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	NPHP1	O15259	732 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	GTF2E1	P29083	439 aa	Predicted RBP	12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	PRELP	P51888	382 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	ARHGAP27	Q6ZUM4	889 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	CDCA7L	Q96GN5	454 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	NLRP3	Q96P20	1036 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	TRMT112	Q9UI30	125 aa	Known RBP	12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	SBF1	O95248	1867 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	LAMB2	P55268	1798 aa		12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	DDX60	Q8IY21	1712 aa	Known RBP	12.48	□□□□□ -0.41
PTPN18-210	ENST00000479295	ATP5J2-PTCD1	G3V325	749 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	TCERG1	O14776	1098 aa	Known RBP	12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	IGKV5-2	P06315	115 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	CT47B1	P0C2W7	299 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	SF3B3	Q15393	1217 aa	Known RBP	12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	SOGA3	Q5TF21	947 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	SYNE4	Q8N205	404 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	MYD88	Q99836	296 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	MAP3K2	Q9Y2U5	619 aa		12.47	□□□□□ -0.41
PTPN18-210	ENST00000479295	CDHR2	Q9BYE9	1310 aa		12.46	□□□□□ -0.41
PTPN18-210	ENST00000479295	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.46	□□□□□ -0.41
PTPN18-210	ENST00000479295	PCCA	P05165	728 aa	Predicted RBP	12.46	□□□□□ -0.41
PTPN18-210	ENST00000479295	NEURL1B	A8MQ27	555 aa		12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295	C21orf2	O43822	256 aa		12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295	CC2D2B	Q6DHV5	1058 aa		12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295	MRPL50	Q8N5N7	158 aa	Known RBP	12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295	FAM89A	Q96GI7	184 aa		12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295	CWC25	Q9NXE8	425 aa	Predicted RBP	12.45	□□□□□ -0.42
PTPN18-210	ENST00000479295		H7C1W4	665 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	HCLS1	P14317	486 aa	Predicted RBP	12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	LMNB1	P20700	586 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	BRPF1	P55201	1214 aa	Predicted RBP	12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	CASP7	P55210	303 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	ALDH1L2	Q3SY69	923 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	GRIPAP1	Q4V328	841 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	LINS1	Q8NG48	757 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	DNAAF4	Q8WXU2	420 aa		12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	RBM17	Q96I25	401 aa	Known RBP	12.44	□□□□□ -0.42
PTPN18-210	ENST00000479295	ABCC4	O15439	1325 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	IRS4	O14654	1257 aa	Predicted RBP	12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	BBOX1	O75936	387 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	RASSF7	Q02833	373 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	FKBP5	Q13451	457 aa	Predicted RBP	12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	CCDC93	Q567U6	631 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	BEND3	Q5T5X7	828 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	C9orf131	Q5VYM1	1079 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	RPGR	Q92834	1020 aa	Known RBP	12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	PLA2G12B	Q9BX93	195 aa		12.43	□□□□□ -0.42
PTPN18-210	ENST00000479295	CACNA1S	Q13698	1873 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	HSP90B1	P14625	803 aa	Known RBP	12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	NEXN	Q0ZGT2	675 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	GCKR	Q14397	625 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	CWF19L2	Q2TBE0	894 aa	Known RBP	12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	RTKN2	Q8IZC4	609 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	SSH1	Q8WYL5	1049 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	PSMD1	Q99460	953 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	TAOK3	Q9H2K8	898 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	ATP6V0A2	Q9Y487	856 aa		12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	DICER1	Q9UPY3	1922 aa	Known RBP	12.42	□□□□□ -0.42
PTPN18-210	ENST00000479295	LRRC37A	A6NMS7	1700 aa		12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	PDE8A	O60658	829 aa		12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	GRAP	Q13588	217 aa		12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	TMC4	Q7Z404	712 aa		12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	SP8	Q8IXZ3	490 aa		12.41	□□□□□ -0.42
PTPN18-210	ENST00000479295	GRAPL	Q8TC17	118 aa	Predicted RBP	12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms