RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
GSDMB-209ENST00000479136 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
GSDMB-209ENST00000479136 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
GSDMB-209ENST00000479136 ZNF771Q7L3S4 317 aaPredicted RBP13.29□□□□□ -0.28
GSDMB-209ENST00000479136 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
GSDMB-209ENST00000479136 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
GSDMB-209ENST00000479136 CALCOCO1Q9P1Z2 691 aa13.29□□□□□ -0.28
GSDMB-209ENST00000479136 SATB1Q01826 763 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 PSMD1Q99460 953 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 MEIS3Q99687 375 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 SRCIN1Q9C0H9 1055 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 NOL7Q9UMY1 257 aaKnown RBP13.28□□□□□ -0.28
GSDMB-209ENST00000479136 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 TOGARAM1Q9Y4F4 1720 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 BCL9O00512 1426 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 TRAK2O60296 914 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 GTF2F1P35269 517 aaKnown RBP eCLIP13.28□□□□□ -0.28
GSDMB-209ENST00000479136 MFAP1P55081 439 aaKnown RBP13.28□□□□□ -0.28
GSDMB-209ENST00000479136 PDIA6Q15084 440 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
GSDMB-209ENST00000479136 FEZ1Q99689 392 aa13.28□□□□□ -0.28
GSDMB-209ENST00000479136 KSR2Q6VAB6 950 aa13.27□□□□□ -0.28
GSDMB-209ENST00000479136 COPS6Q7L5N1 327 aa13.27□□□□□ -0.28
GSDMB-209ENST00000479136 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.28
GSDMB-209ENST00000479136 C5P01031 1676 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.29
GSDMB-209ENST00000479136 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 MYRIPQ8NFW9 859 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
GSDMB-209ENST00000479136 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
GSDMB-209ENST00000479136 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
GSDMB-209ENST00000479136 IGSF3O75054 1194 aa13.26□□□□□ -0.29
GSDMB-209ENST00000479136 GNAI3P08754 354 aa13.26□□□□□ -0.29
GSDMB-209ENST00000479136 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
GSDMB-209ENST00000479136 RAI14Q9P0K7 980 aa13.26□□□□□ -0.29
GSDMB-209ENST00000479136 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
GSDMB-209ENST00000479136 CACNA1FO60840 1977 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 STARD3NLO95772 234 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 A1BGP04217 495 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 ADCY9O60503 1353 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 PXDNLA1KZ92 1463 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 GNAI2P04899 355 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 NEXNQ0ZGT2 675 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 NCAPGQ9BPX3 1015 aa13.25□□□□□ -0.29
GSDMB-209ENST00000479136 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
GSDMB-209ENST00000479136 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
GSDMB-209ENST00000479136 CAPN2P17655 700 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 HMGN5P82970 282 aaKnown RBP13.24□□□□□ -0.29
GSDMB-209ENST00000479136 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 ANKRD13DQ6ZTN6 518 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 CREBRFQ8IUR6 639 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 BEND3Q5T5X7 828 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
GSDMB-209ENST00000479136 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
GSDMB-209ENST00000479136 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
GSDMB-209ENST00000479136 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
GSDMB-209ENST00000479136 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
GSDMB-209ENST00000479136 SH3BP1Q9Y3L3 701 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 ATRNO75882 1429 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 KCNQ2O43526 872 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
GSDMB-209ENST00000479136 SEPT12Q8IYM1 358 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
GSDMB-209ENST00000479136 ITGB4P16144 1822 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 HMMRO75330 724 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 SMARCC1Q92922 1105 aaPredicted RBP13.22□□□□□ -0.29
GSDMB-209ENST00000479136 MYD88Q99836 296 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 PDZRN3Q9UPQ7 1066 aa13.22□□□□□ -0.29
GSDMB-209ENST00000479136 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 USP44Q9H0E7 712 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 BRMS1Q9HCU9 246 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 LAMB4A4D0S4 1761 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 CCDC172P0C7W6 258 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
GSDMB-209ENST00000479136 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 GCC1Q96CN9 775 aa13.21□□□□□ -0.29
GSDMB-209ENST00000479136 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
GSDMB-209ENST00000479136 ATP10DQ9P241 1426 aa13.21□□□□□ -0.3
GSDMB-209ENST00000479136 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
GSDMB-209ENST00000479136 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
GSDMB-209ENST00000479136 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms