RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 CEBPAP49715 358 aaPredicted RBP13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 STK3Q13188 491 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 ME3Q16798 604 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 KRT222Q8N1A0 295 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 TMEM87AQ8NBN3 555 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 DNAAF4Q8WXU2 420 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 MYCBPQ99417 103 aaPredicted RBP13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 AMOTL2Q9Y2J4 779 aa13.08□□□□□ -0.32
LRRFIP1-211ENST00000478958 CTIFO43310 598 aaKnown RBP13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 HOXC9P31274 260 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 CYP46A1Q9Y6A2 500 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 IFIT2P09913 472 aaKnown RBP13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 POLA2Q14181 598 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 SIRT1Q96EB6 747 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 TMX1Q9H3N1 280 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 AOX1Q06278 1338 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
LRRFIP1-211ENST00000478958 SPTLC3Q9NUV7 552 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 KDRP35968 1356 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 SIL1Q9H173 461 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 PPP6R1Q9UPN7 881 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 NRXN3Q9Y4C0 1643 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 MAP3K5Q99683 1374 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 HNRNPH2P55795 449 aaKnown RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 NCBP1Q09161 790 aaKnown RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 CWF19L2Q2TBE0 894 aaKnown RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 AACSQ86V21 672 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 DRC7Q8IY82 874 aa13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 CCDC8Q9H0W5 538 aaPredicted RBP13.06□□□□□ -0.32
LRRFIP1-211ENST00000478958 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 LIG1P18858 919 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 TTC6Q86TZ1 520 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 RASSF4Q9H2L5 321 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 TPCN1Q9ULQ1 816 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 NOP2P46087 812 aaKnown RBP13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 RUFY2Q8WXA3 655 aa13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 RBM8AQ9Y5S9 174 aaKnown RBP13.05□□□□□ -0.32
LRRFIP1-211ENST00000478958 TMEM2Q9UHN6 1383 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 PTGS1P23219 599 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 AIMP1Q12904 312 aaKnown RBP13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 FUCA2Q9BTY2 467 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 ITSN1Q15811 1721 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 CTR9Q6PD62 1173 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 BOLA2Q9H3K6 86 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 TTC21AQ8NDW8 1320 aa13.04□□□□□ -0.32
LRRFIP1-211ENST00000478958 TECPR2O15040 1411 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 TEFQ10587 303 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 KIF18AQ8NI77 898 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 DACT1Q9NYF0 836 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 LRMPQ12912 555 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 KIAA1524Q8TCG1 905 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 MAP3K2Q9Y2U5 619 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 TNRQ92752 1358 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 PRAMEF22A3QJZ6 481 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 FOSBP53539 338 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 KRT85P78386 507 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 CREB3L3Q68CJ9 461 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 TMED8Q6PL24 325 aaPredicted RBP13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
LRRFIP1-211ENST00000478958 TSPOAP1O95153 1857 aa13.02□□□□□ -0.32
LRRFIP1-211ENST00000478958 PPFIA3O75145 1194 aa13.02□□□□□ -0.33
LRRFIP1-211ENST00000478958 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms