RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
SCAMP3-206ENST00000478737 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
SCAMP3-206ENST00000478737 NUTM1Q86Y26 1132 aa12.81□□□□□ -0.36
SCAMP3-206ENST00000478737 ZNF622Q969S3 477 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCAMP3-206ENST00000478737 SLC4A2P04920 1241 aa12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 KSR2Q6VAB6 950 aa12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
SCAMP3-206ENST00000478737 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 E9PSI1 815 aa12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 ALDH1B1P30837 517 aa12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
SCAMP3-206ENST00000478737 PRPF40BQ6NWY9 871 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 G2E3Q7L622 706 aa12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 SH3TC1Q8TE82 1336 aa12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 ADCY9O60503 1353 aa12.78□□□□□ -0.36
SCAMP3-206ENST00000478737 BRCA1P38398 1863 aaKnown RBP12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
SCAMP3-206ENST00000478737 ANKRD31Q8N7Z5 1873 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 NFKBIEO00221 500 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 TCERG1O14776 1098 aaKnown RBP12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 C21orf2O43822 256 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 FLIIQ13045 1269 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 CDCA7LQ96GN5 454 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 MAP3K2Q9Y2U5 619 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 LTBP3Q9NS15 1303 aa12.76□□□□□ -0.37
SCAMP3-206ENST00000478737 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 PRELPP51888 382 aa12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 SF3B3Q15393 1217 aaKnown RBP12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 ZNF428Q96B54 188 aa12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 MYD88Q99836 296 aa12.75□□□□□ -0.37
SCAMP3-206ENST00000478737 CHD4Q14839 1912 aa12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 NEFLP07196 543 aa12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 LMNB1P20700 586 aa12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 CC2D2BQ6DHV5 1058 aa12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
SCAMP3-206ENST00000478737 BBOX1O75936 387 aa12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 PCCAP05165 728 aaPredicted RBP12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 HSP90B1P14625 803 aaKnown RBP12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 RTKN2Q8IZC4 609 aa12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
SCAMP3-206ENST00000478737 ZC3H4Q9UPT8 1303 aaKnown RBP12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 CCDC93Q567U6 631 aa12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 LINS1Q8NG48 757 aa12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 DNAAF4Q8WXU2 420 aa12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
SCAMP3-206ENST00000478737 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 LAMB2P55268 1798 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 NEURL1BA8MQ27 555 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 H7C1W4 665 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 RASSF7Q02833 373 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 RNF181Q9P0P0 153 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 SUPT16HQ9Y5B9 1047 aaKnown RBP12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 CACNA1SQ13698 1873 aa12.71□□□□□ -0.37
SCAMP3-206ENST00000478737 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.38
SCAMP3-206ENST00000478737 CDHR2Q9BYE9 1310 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 GCKRQ14397 625 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 OLFM4Q6UX06 510 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 DDX46Q7L014 1031 aaKnown RBP12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 SP8Q8IXZ3 490 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 MRPL50Q8N5N7 158 aaKnown RBP12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 PSMD1Q99460 953 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 ATP6V0A2Q9Y487 856 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 MYH3P11055 1940 aa12.7□□□□□ -0.38
SCAMP3-206ENST00000478737 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 ABCC4O15439 1325 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 PDE8AO60658 829 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 BRPF1P55201 1214 aaPredicted RBP12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 GRAPQ13588 217 aa12.69□□□□□ -0.38
SCAMP3-206ENST00000478737 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms