RNA–Protein interactions for RNA: ENST00000478527.1

SDK1-207, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 3

Gene SDK1, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-207ENST00000478527 TAF1P21675 1872 aa20.39■□□□□ 0.86
SDK1-207ENST00000478527 C21orf2O43822 256 aa20.39■□□□□ 0.85
SDK1-207ENST00000478527 PPP1R42Q7Z4L9 355 aa20.39■□□□□ 0.85
SDK1-207ENST00000478527 PLBD2Q8NHP8 589 aa20.39■□□□□ 0.85
SDK1-207ENST00000478527 GPBP1L1Q9HC44 474 aaPredicted RBP20.39■□□□□ 0.85
SDK1-207ENST00000478527 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
SDK1-207ENST00000478527 PRELPP51888 382 aa20.38■□□□□ 0.85
SDK1-207ENST00000478527 TCIRG1Q13488 830 aa20.38■□□□□ 0.85
SDK1-207ENST00000478527 NLRP10Q86W26 655 aa20.38■□□□□ 0.85
SDK1-207ENST00000478527 MYH3P11055 1940 aa20.37■□□□□ 0.85
SDK1-207ENST00000478527 SNED1Q8TER0 1413 aa20.37■□□□□ 0.85
SDK1-207ENST00000478527 LTBP3Q9NS15 1303 aa20.37■□□□□ 0.85
SDK1-207ENST00000478527 LRRC37AA6NMS7 1700 aa20.37■□□□□ 0.85
SDK1-207ENST00000478527 UTP14AQ9BVJ6 771 aaKnown RBP20.37■□□□□ 0.85
SDK1-207ENST00000478527 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
SDK1-207ENST00000478527 ZC3H4Q9UPT8 1303 aaKnown RBP20.36■□□□□ 0.85
SDK1-207ENST00000478527 LMNB1P20700 586 aa20.36■□□□□ 0.85
SDK1-207ENST00000478527 C3orf67Q6ZVT6 689 aa20.36■□□□□ 0.85
SDK1-207ENST00000478527 GOLGA2Q08379 1002 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 SOGA3Q5TF21 947 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 CCDC30Q5VVM6 783 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 ANKRD13DQ6ZTN6 518 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 WDR63Q8IWG1 891 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 TAOK3Q9H2K8 898 aa20.35■□□□□ 0.85
SDK1-207ENST00000478527 PHAXQ9H814 394 aaKnown RBP20.35■□□□□ 0.85
SDK1-207ENST00000478527 TWISTNBQ3B726 338 aaPredicted RBP20.34■□□□□ 0.85
SDK1-207ENST00000478527 CCDC93Q567U6 631 aa20.34■□□□□ 0.85
SDK1-207ENST00000478527 C7orf43Q8WVR3 580 aa20.34■□□□□ 0.85
SDK1-207ENST00000478527 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
SDK1-207ENST00000478527 ISCA1Q9BUE6 129 aa20.34■□□□□ 0.85
SDK1-207ENST00000478527 SH3TC1Q8TE82 1336 aa20.33■□□□□ 0.85
SDK1-207ENST00000478527 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
SDK1-207ENST00000478527 CHMP4AQ9BY43 222 aa20.32■□□□□ 0.84
SDK1-207ENST00000478527 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
SDK1-207ENST00000478527 COL4A1P02462 1669 aa20.32■□□□□ 0.84
SDK1-207ENST00000478527 ZNF521Q96K83 1311 aa20.31■□□□□ 0.84
SDK1-207ENST00000478527 ATP5J2-PTCD1G3V325 749 aa20.31■□□□□ 0.84
SDK1-207ENST00000478527 OLFM4Q6UX06 510 aa20.31■□□□□ 0.84
SDK1-207ENST00000478527 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
SDK1-207ENST00000478527 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
SDK1-207ENST00000478527 TRMT112Q9UI30 125 aaKnown RBP20.31■□□□□ 0.84
SDK1-207ENST00000478527 KIF3CO14782 793 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 ALDH1B1P30837 517 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 C1QTNF8P60827 252 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 RIC3Q7Z5B4 369 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 NMRK2Q9NPI5 230 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 SPEF2Q9C093 1822 aa20.3■□□□□ 0.84
SDK1-207ENST00000478527 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
SDK1-207ENST00000478527 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
SDK1-207ENST00000478527 NLRP3Q96P20 1036 aa20.29■□□□□ 0.84
SDK1-207ENST00000478527 ABCC4O15439 1325 aa20.28■□□□□ 0.84
SDK1-207ENST00000478527 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
SDK1-207ENST00000478527 SLC51AQ86UW1 340 aa20.28■□□□□ 0.84
SDK1-207ENST00000478527 RBM17Q96I25 401 aaKnown RBP20.28■□□□□ 0.84
SDK1-207ENST00000478527 CRAMP1Q96RY5 1269 aa20.28■□□□□ 0.84
SDK1-207ENST00000478527 COL4A5P29400 1685 aa20.28■□□□□ 0.84
SDK1-207ENST00000478527 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.84
SDK1-207ENST00000478527 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
SDK1-207ENST00000478527 CCER2I3L3R5 266 aa20.27■□□□□ 0.84
SDK1-207ENST00000478527 PPEF1O14829 653 aaPredicted RBP20.27■□□□□ 0.84
SDK1-207ENST00000478527 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
SDK1-207ENST00000478527 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
SDK1-207ENST00000478527 EXOSC9Q06265 439 aaKnown RBP20.27■□□□□ 0.84
SDK1-207ENST00000478527 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
SDK1-207ENST00000478527 MYD88Q99836 296 aa20.27■□□□□ 0.84
SDK1-207ENST00000478527 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
SDK1-207ENST00000478527 G2E3Q7L622 706 aa20.25■□□□□ 0.83
SDK1-207ENST00000478527 RTKN2Q8IZC4 609 aa20.25■□□□□ 0.83
SDK1-207ENST00000478527 FAM89AQ96GI7 184 aa20.25■□□□□ 0.83
SDK1-207ENST00000478527 METTL22Q9BUU2 404 aaPredicted RBP20.25■□□□□ 0.83
SDK1-207ENST00000478527 MAP3K2Q9Y2U5 619 aa20.25■□□□□ 0.83
SDK1-207ENST00000478527 SCN4AP35499 1836 aa20.24■□□□□ 0.83
SDK1-207ENST00000478527 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 VAMP4O75379 141 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 FLIIQ13045 1269 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
SDK1-207ENST00000478527 CC2D2BQ6DHV5 1058 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
SDK1-207ENST00000478527 ZNF277Q9NRM2 450 aaPredicted RBP20.23■□□□□ 0.83
SDK1-207ENST00000478527 GLTPD2A6NH11 291 aa20.22■□□□□ 0.83
SDK1-207ENST00000478527 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
SDK1-207ENST00000478527 ZBTB38Q8NAP3 1195 aaPredicted RBP20.22■□□□□ 0.83
SDK1-207ENST00000478527 CCDC191Q8NCU4 936 aa20.22■□□□□ 0.83
SDK1-207ENST00000478527 PSMD1Q99460 953 aa20.22■□□□□ 0.83
SDK1-207ENST00000478527 CWC25Q9NXE8 425 aaPredicted RBP20.22■□□□□ 0.83
SDK1-207ENST00000478527 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
SDK1-207ENST00000478527 PCCAP05165 728 aaPredicted RBP20.2■□□□□ 0.82
SDK1-207ENST00000478527 IGKV5-2P06315 115 aa20.2■□□□□ 0.82
SDK1-207ENST00000478527 IARSP41252 1262 aaKnown RBP20.2■□□□□ 0.82
SDK1-207ENST00000478527 GRAPQ13588 217 aa20.2■□□□□ 0.82
SDK1-207ENST00000478527 DDX46Q7L014 1031 aaKnown RBP20.2■□□□□ 0.82
SDK1-207ENST00000478527 GRAPLQ8TC17 118 aaPredicted RBP20.2■□□□□ 0.82
SDK1-207ENST00000478527 ATP6V0A2Q9Y487 856 aa20.2■□□□□ 0.82
SDK1-207ENST00000478527 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
SDK1-207ENST00000478527 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
SDK1-207ENST00000478527 ZNF541Q9H0D2 1346 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms