RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 TRIM28Q13263 835 aaKnown RBP14.17□□□□□ -0.14
GFM1-206ENST00000478251 MTX1Q13505 466 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 NLRP10Q86W26 655 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 ZNF34Q8IZ26 560 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 DDX60Q8IY21 1712 aaKnown RBP14.17□□□□□ -0.14
GFM1-206ENST00000478251 APBA3O96018 575 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 RGS3P49796 1198 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 NUCB1Q02818 461 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 SRP68Q9UHB9 627 aaKnown RBP14.17□□□□□ -0.14
GFM1-206ENST00000478251 EXOC6BQ9Y2D4 811 aa14.17□□□□□ -0.14
GFM1-206ENST00000478251 COL24A1Q17RW2 1714 aa14.16□□□□□ -0.14
GFM1-206ENST00000478251 SRGAP3O43295 1099 aa14.16□□□□□ -0.14
GFM1-206ENST00000478251 PLSCR1O15162 318 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 FOXO4P98177 505 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 GCC1Q96CN9 775 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 FAM89AQ96GI7 184 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 LNPKQ9C0E8 428 aa14.15□□□□□ -0.14
GFM1-206ENST00000478251 RABL6Q3YEC7 729 aaPredicted RBP14.15□□□□□ -0.14
GFM1-206ENST00000478251 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
GFM1-206ENST00000478251 LAMB2P55268 1798 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 APBB1O00213 710 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
GFM1-206ENST00000478251 PHF14O94880 888 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 ZNF827Q17R98 1081 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 KLHDC4Q8TBB5 520 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 PA2G4Q9UQ80 394 aaKnown RBP14.14□□□□□ -0.15
GFM1-206ENST00000478251 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 SUSD4Q5VX71 490 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 CHD1LQ86WJ1 897 aa14.14□□□□□ -0.15
GFM1-206ENST00000478251 RTCBQ9Y3I0 505 aaKnown RBP14.14□□□□□ -0.15
GFM1-206ENST00000478251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.14□□□□□ -0.15
GFM1-206ENST00000478251 HMMRO75330 724 aa14.13□□□□□ -0.15
GFM1-206ENST00000478251 RFX5P48382 616 aaPredicted RBP14.13□□□□□ -0.15
GFM1-206ENST00000478251 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
GFM1-206ENST00000478251 OTUD7AQ8TE49 926 aaPredicted RBP14.13□□□□□ -0.15
GFM1-206ENST00000478251 NARFQ9UHQ1 456 aa14.13□□□□□ -0.15
GFM1-206ENST00000478251 COL4A1P02462 1669 aa14.12□□□□□ -0.15
GFM1-206ENST00000478251 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
GFM1-206ENST00000478251 PCCAP05165 728 aaPredicted RBP14.12□□□□□ -0.15
GFM1-206ENST00000478251 HSP90AB3PQ58FF7 597 aa14.12□□□□□ -0.15
GFM1-206ENST00000478251 ZBTB38Q8NAP3 1195 aaPredicted RBP14.12□□□□□ -0.15
GFM1-206ENST00000478251 AK7Q96M32 723 aa14.12□□□□□ -0.15
GFM1-206ENST00000478251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
GFM1-206ENST00000478251 TBC1D9BQ66K14 1250 aa14.12□□□□□ -0.15
GFM1-206ENST00000478251 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
GFM1-206ENST00000478251 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
GFM1-206ENST00000478251 TAF1P21675 1872 aa14.11□□□□□ -0.15
GFM1-206ENST00000478251 LMBR1LQ6UX01 489 aa14.11□□□□□ -0.15
GFM1-206ENST00000478251 FAM177BA6PVY3 158 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 NTSR2O95665 410 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 CLEC4GQ6UXB4 293 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 CDHR2Q9BYE9 1310 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 EN1Q05925 392 aaPredicted RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 EZH2Q15910 746 aaKnown RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 PELP1Q8IZL8 1130 aaKnown RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 CAMKK2Q96RR4 588 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
GFM1-206ENST00000478251 TRMT112Q9UI30 125 aaKnown RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 NOP58Q9Y2X3 529 aaKnown RBP14.1□□□□□ -0.15
GFM1-206ENST00000478251 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
GFM1-206ENST00000478251 TRAPPC3LQ5T215 181 aa14.09□□□□□ -0.15
GFM1-206ENST00000478251 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
GFM1-206ENST00000478251 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
GFM1-206ENST00000478251 CCDC85AQ96PX6 553 aaPredicted RBP14.09□□□□□ -0.15
GFM1-206ENST00000478251 PLA2G12BQ9BX93 195 aa14.09□□□□□ -0.15
GFM1-206ENST00000478251 TNRC6CQ9HCJ0 1690 aaKnown RBP14.09□□□□□ -0.15
GFM1-206ENST00000478251 SPEF2Q9C093 1822 aa14.08□□□□□ -0.15
GFM1-206ENST00000478251 ANO8Q9HCE9 1232 aaPredicted RBP14.08□□□□□ -0.15
GFM1-206ENST00000478251 SALL3Q9BXA9 1300 aa14.08□□□□□ -0.16
GFM1-206ENST00000478251 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
GFM1-206ENST00000478251 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
GFM1-206ENST00000478251 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
GFM1-206ENST00000478251 SIL1Q9H173 461 aa14.08□□□□□ -0.16
GFM1-206ENST00000478251 ABCC12Q96J65 1359 aa14.08□□□□□ -0.16
GFM1-206ENST00000478251 SASH1O94885 1247 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 CSF1RP07333 972 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 HCLS1P14317 486 aaPredicted RBP14.07□□□□□ -0.16
GFM1-206ENST00000478251 RFC4P35249 363 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 C3orf67Q6ZVT6 689 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 IL1RAPL2Q9NP60 686 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 HDAC5Q9UQL6 1122 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 ZNF652Q9Y2D9 606 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 RGL2O15211 777 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 ZPR1O75312 459 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 GYS1P13807 737 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 SSFA2P28290 1259 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 TTLL11Q8NHH1 800 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 ZNF594Q96JF6 807 aaPredicted RBP14.07□□□□□ -0.16
GFM1-206ENST00000478251 UTP14AQ9BVJ6 771 aaKnown RBP14.07□□□□□ -0.16
GFM1-206ENST00000478251 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
GFM1-206ENST00000478251 SH3TC1Q8TE82 1336 aa14.06□□□□□ -0.16
GFM1-206ENST00000478251 PARP10Q53GL7 1025 aa14.06□□□□□ -0.16
GFM1-206ENST00000478251 RHPN1Q8TCX5 695 aa14.06□□□□□ -0.16
GFM1-206ENST00000478251 LRRCC1Q9C099 1032 aa14.06□□□□□ -0.16
GFM1-206ENST00000478251 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms