RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 K7ELQ4 463 aaPredicted RBP6.59□□□□□ -1.35
SF3B6-202ENST00000478050 TRIM66O15016 1216 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 BCRP11274 1271 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 IRX6P78412 446 aaPredicted RBP6.59□□□□□ -1.35
SF3B6-202ENST00000478050 TMF1P82094 1093 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 TUSC1Q2TAM9 212 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 NBPF1Q3BBV0 1214 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
SF3B6-202ENST00000478050 MEX3CQ5U5Q3 659 aaKnown RBP6.59□□□□□ -1.35
SF3B6-202ENST00000478050 MYSM1Q5VVJ2 828 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 MBIPQ9NS73 344 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 CUEDC1Q9NWM3 386 aaPredicted RBP6.59□□□□□ -1.35
SF3B6-202ENST00000478050 EFCAB6Q5THR3 1501 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 LRRC7Q96NW7 1537 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 SCAF11Q99590 1463 aaKnown RBP6.59□□□□□ -1.36
SF3B6-202ENST00000478050 NPATQ14207 1427 aa6.59□□□□□ -1.36
SF3B6-202ENST00000478050 MYO3AQ8NEV4 1616 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 RAB15P59190 212 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 RIPOR1Q6ZS17 1223 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 GMCL1Q96IK5 515 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 TESK2Q96S53 571 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 FKBPLQ9UIM3 349 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 LMTK2Q8IWU2 1503 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 MYOM2P54296 1465 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 CDK12Q9NYV4 1490 aaPredicted RBP6.58□□□□□ -1.36
SF3B6-202ENST00000478050 MROH2AA6NES4 1674 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 ABCA6Q8N139 1617 aa6.58□□□□□ -1.36
SF3B6-202ENST00000478050 GPR25O00155 361 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 ADH1AP07327 375 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 PTGIRP43119 386 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 PDE3BQ13370 1112 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 CDCA8Q53HL2 280 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 FOXD4L5Q5VV16 416 aaPredicted RBP6.57□□□□□ -1.36
SF3B6-202ENST00000478050 PRICKLE2Q7Z3G6 844 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 TMPRSS4Q9NRS4 437 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 BLMP54132 1417 aaPredicted RBP6.57□□□□□ -1.36
SF3B6-202ENST00000478050 PPLO60437 1756 aa6.57□□□□□ -1.36
SF3B6-202ENST00000478050 EIF3AQ14152 1382 aaKnown RBP6.57□□□□□ -1.36
SF3B6-202ENST00000478050 FANCIQ9NVI1 1328 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 ZC3H13Q5T200 1668 aaKnown RBP6.56□□□□□ -1.36
SF3B6-202ENST00000478050 ZNF518AQ6AHZ1 1483 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 PROCP04070 461 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 RHOQP17081 205 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 PTK2Q05397 1052 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 CNGB1Q14028 1251 aaPredicted RBP6.56□□□□□ -1.36
SF3B6-202ENST00000478050 NBPF20Q3BBV1 942 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 TRIM22Q8IYM9 498 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 ZNF837Q96EG3 531 aaPredicted RBP6.56□□□□□ -1.36
SF3B6-202ENST00000478050 ANP32EQ9BTT0 268 aa6.56□□□□□ -1.36
SF3B6-202ENST00000478050 NSFL1CQ9UNZ2 370 aaKnown RBP6.56□□□□□ -1.36
SF3B6-202ENST00000478050 ASXL1Q8IXJ9 1541 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 ITGB2P05107 769 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 CTDSPL2Q05D32 466 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 ZNF784Q8NCA9 323 aaPredicted RBP6.55□□□□□ -1.36
SF3B6-202ENST00000478050 TRERF1Q96PN7 1200 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 ADGRB3O60242 1522 aa6.55□□□□□ -1.36
SF3B6-202ENST00000478050 CFAP65Q6ZU64 1925 aaKnown RBP6.54□□□□□ -1.36
SF3B6-202ENST00000478050 CLK2P49760 499 aaKnown RBP6.54□□□□□ -1.36
SF3B6-202ENST00000478050 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
SF3B6-202ENST00000478050 PANK3Q9H999 370 aa6.54□□□□□ -1.36
SF3B6-202ENST00000478050 ATAD2Q6PL18 1390 aa6.54□□□□□ -1.36
SF3B6-202ENST00000478050 NPC1L1Q9UHC9 1359 aa6.54□□□□□ -1.36
SF3B6-202ENST00000478050 MLH3Q9UHC1 1453 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 NRXN1Q9ULB1 1477 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 ZC3H4Q9UPT8 1303 aaKnown RBP6.53□□□□□ -1.36
SF3B6-202ENST00000478050 CEP170BQ9Y4F5 1589 aaPredicted RBP6.53□□□□□ -1.36
SF3B6-202ENST00000478050 PIK3C2GO75747 1445 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 FAM135BQ49AJ0 1406 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 H7C1W4 665 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 KIF3BO15066 747 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 ADD1P35611 737 aaKnown RBP6.53□□□□□ -1.36
SF3B6-202ENST00000478050 BAG6P46379 1132 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 Q8N3U1 123 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 ADAM32Q8TC27 787 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 GTPBP3Q969Y2 492 aaKnown RBP6.53□□□□□ -1.36
SF3B6-202ENST00000478050 ACDQ96AP0 544 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 JCADQ9P266 1359 aa6.53□□□□□ -1.36
SF3B6-202ENST00000478050 ZNF142P52746 1687 aaPredicted RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 QRICH2Q9H0J4 1663 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 LRP5O75197 1615 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 ERVH48-1M5A8F1 160 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 MX2P20592 715 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 RNF144AP50876 292 aaPredicted RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 RRP1P56182 461 aaKnown RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 DBN1Q16643 649 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 CC2D1BQ5T0F9 858 aaKnown RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 DZIP3Q86Y13 1208 aaKnown RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 CCDC136Q96JN2 1154 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 GAS2L1Q99501 681 aaPredicted RBP6.52□□□□□ -1.37
SF3B6-202ENST00000478050 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 ZMYND15Q9H091 742 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 RSPH6AQ9H0K4 717 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 POLR3EQ9NVU0 708 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 KNSTRNQ9Y448 316 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 GPSM3Q9Y4H4 160 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 UGGT1Q9NYU2 1555 aa6.52□□□□□ -1.37
SF3B6-202ENST00000478050 AGLP35573 1532 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 BTBD11A6QL63 1104 aa6.51□□□□□ -1.37
SF3B6-202ENST00000478050 LILRA1O75019 489 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms