RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 GDPD2Q9HCC8 539 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 NAGPAQ9UK23 515 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 SERTM1A2A2V5 107 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 ABL2P42684 1182 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 IRAK1P51617 712 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 EML3Q32P44 896 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 ANKIB1Q9P2G1 1089 aa8.49□□□□□ -1.05
NCKAP1-204ENST00000477988 SFI1A8K8P3 1242 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 SSTR4P31391 388 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 TBC1D8BQ0IIM8 1120 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 TBCELQ5QJ74 424 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 POTEAQ6S8J7 498 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
NCKAP1-204ENST00000477988 TAL1P17542 331 aaPredicted RBP8.47□□□□□ -1.05
NCKAP1-204ENST00000477988 FZD5Q13467 585 aa8.47□□□□□ -1.05
NCKAP1-204ENST00000477988 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
NCKAP1-204ENST00000477988 ZNF280CQ8ND82 737 aa8.47□□□□□ -1.05
NCKAP1-204ENST00000477988 DNAJB12Q9NXW2 375 aaKnown RBP8.47□□□□□ -1.05
NCKAP1-204ENST00000477988 RGS9O75916 674 aaPredicted RBP8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 FSTP19883 344 aa8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 HIRAP54198 1017 aaPredicted RBP8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 GRIK5Q16478 980 aa8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 IGF2-ASQ6U949 168 aa8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 DZIP1LQ8IYY4 767 aaKnown RBP8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 IGFLR1Q9H665 355 aa8.46□□□□□ -1.06
NCKAP1-204ENST00000477988 GTF2IP78347 998 aa8.45□□□□□ -1.06
NCKAP1-204ENST00000477988 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
NCKAP1-204ENST00000477988 SUSD3Q96L08 255 aa8.45□□□□□ -1.06
NCKAP1-204ENST00000477988 KRTAP4-9Q9BYQ8 210 aa8.45□□□□□ -1.06
NCKAP1-204ENST00000477988 OAS3Q9Y6K5 1087 aaKnown RBP8.44□□□□□ -1.06
NCKAP1-204ENST00000477988 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
NCKAP1-204ENST00000477988 PIK3CDO00329 1044 aa8.43□□□□□ -1.06
NCKAP1-204ENST00000477988 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
NCKAP1-204ENST00000477988 RNF114Q9Y508 228 aa8.43□□□□□ -1.06
NCKAP1-204ENST00000477988 MED26O95402 600 aa8.42□□□□□ -1.06
NCKAP1-204ENST00000477988 SKIP12755 728 aa8.42□□□□□ -1.06
NCKAP1-204ENST00000477988 PSMA6P60900 246 aaKnown RBP8.42□□□□□ -1.06
NCKAP1-204ENST00000477988 GSX2Q9BZM3 304 aa8.42□□□□□ -1.06
NCKAP1-204ENST00000477988 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
NCKAP1-204ENST00000477988 GP2P55259 537 aaKnown RBP8.41□□□□□ -1.06
NCKAP1-204ENST00000477988 PSME1Q06323 249 aa8.41□□□□□ -1.06
NCKAP1-204ENST00000477988 FRRS1LQ9P0K9 344 aa8.41□□□□□ -1.06
NCKAP1-204ENST00000477988 BTLAQ7Z6A9 289 aa8.4□□□□□ -1.06
NCKAP1-204ENST00000477988 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
NCKAP1-204ENST00000477988 ALG2Q9H553 416 aa8.4□□□□□ -1.06
NCKAP1-204ENST00000477988 DLL1O00548 723 aa8.39□□□□□ -1.07
NCKAP1-204ENST00000477988 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
NCKAP1-204ENST00000477988 NCOA4Q13772 614 aa8.39□□□□□ -1.07
NCKAP1-204ENST00000477988 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.39□□□□□ -1.07
NCKAP1-204ENST00000477988 FAM35AQ86V20 835 aa8.38□□□□□ -1.07
NCKAP1-204ENST00000477988 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
NCKAP1-204ENST00000477988 TTC9Q92623 222 aa8.38□□□□□ -1.07
NCKAP1-204ENST00000477988 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
NCKAP1-204ENST00000477988 AKTIPQ9H8T0 292 aa8.38□□□□□ -1.07
NCKAP1-204ENST00000477988 PLAURQ03405 335 aa8.37□□□□□ -1.07
NCKAP1-204ENST00000477988 MCM6Q14566 821 aa8.37□□□□□ -1.07
NCKAP1-204ENST00000477988 WFDC8Q8IUA0 241 aa8.37□□□□□ -1.07
NCKAP1-204ENST00000477988 TMEM130Q8N3G9 435 aa8.37□□□□□ -1.07
NCKAP1-204ENST00000477988 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
NCKAP1-204ENST00000477988 CPB1P15086 417 aa8.36□□□□□ -1.07
NCKAP1-204ENST00000477988 NFKB1P19838 968 aa8.36□□□□□ -1.07
NCKAP1-204ENST00000477988 CCINQ13939 588 aa8.36□□□□□ -1.07
NCKAP1-204ENST00000477988 PCSK7Q16549 785 aa8.36□□□□□ -1.07
NCKAP1-204ENST00000477988 ATP1A2P50993 1020 aa8.35□□□□□ -1.07
NCKAP1-204ENST00000477988 PERM1Q5SV97 790 aa8.35□□□□□ -1.07
NCKAP1-204ENST00000477988 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
NCKAP1-204ENST00000477988 PNMA5Q96PV4 448 aa8.35□□□□□ -1.07
NCKAP1-204ENST00000477988 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
NCKAP1-204ENST00000477988 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 ZBTB42B2RXF5 422 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 M0R2N6 131 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 ZBTB7BO15156 539 aaPredicted RBP8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 ADAMTS4O75173 837 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 ALX3O95076 343 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 TGFB1P01137 390 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 Q6ZS46 218 aa8.34□□□□□ -1.07
NCKAP1-204ENST00000477988 F8W735 103 aaPredicted RBP8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 GSC2O15499 205 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 MAP3K6O95382 1288 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 HIF1AQ16665 826 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 IER5Q5VY09 327 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 ALDH16A1Q8IZ83 802 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 KRTAP4-2Q9BYR5 136 aa8.33□□□□□ -1.08
NCKAP1-204ENST00000477988 SPINK2P20155 84 aa8.32□□□□□ -1.08
NCKAP1-204ENST00000477988 PLEKHM2Q8IWE5 1019 aa8.32□□□□□ -1.08
NCKAP1-204ENST00000477988 TPCN2Q8NHX9 752 aa8.32□□□□□ -1.08
NCKAP1-204ENST00000477988 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
NCKAP1-204ENST00000477988 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
NCKAP1-204ENST00000477988 PTCD1O75127 700 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 CCDC102BQ68D86 513 aa8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 ELMSAN1Q6PJG2 1045 aa8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 DEPDC4Q8N2C3 294 aa8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
NCKAP1-204ENST00000477988 KIAA1024Q9UPX6 916 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms